Coregonus clupeaformis (lake whitefish): 121579374
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Entry
121579374 CDS
T08357
Symbol
ap2b1
Name
(RefSeq) AP-2 complex subunit beta isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121579374 (ap2b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579374 (ap2b1)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
121579374 (ap2b1)
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
NELF-A_N
Arm_2
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
121579374
NCBI-ProteinID:
XP_041749853
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Position
13:17700671..17806230
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AA seq
952 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAAPIEQAQSVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAALSSGLNDLFELSTGMAITTG
GYVTPKSVWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIDVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYDSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatctttgagctgaaggca
gagctgaacaatgagaagaaggagaagaggaaggaggcagtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagacgtggtgaactgcatgcagact
gacaacctggagctgaaaaagctggtctacctgtacctgatgaactacgccaagagccag
cccgacatggccatcatggctgtcaatagctttgtcaaggactgtgaggaccctaacccc
ctgatccgggccctggccgtgcgcaccatgggctgcatccgcgtggacaagattacagag
tacctgtgtgagccgctgaggaagtgtctgaaggacgaggacccatacgtgagaaagacg
gcagcagtgtgcgtggcaaagctccacgacatcaacgcccagatggtggaggaccagggt
ttcctggactccctcagggacctcattgccgactccaaccccatggtggtggccaacgcg
gtggcagctctgtctgagatcagtgagtcccaccccaacagcaacctgctggacctcaac
ccacagaacatcaacaagctgctgacggccctcaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgggtcacgccccgtctctcccacgccaactcggcggtggtgctgtcggctgtc
aaggtgctgatgaagttcctggagctgctgcccaaggagtcggactactacaacaccctg
ctgaagaagctgtccccaccgctggtcacccttctctctggggagccagaggtccagtat
gtggccctcaggaatatcaacctcatcgtccagaaaaggcctgagatcctgaagcaggag
atcaaggtgttctttgtcaagtacaatgaccccatctacgtaaaacttgagaaactggac
atcatgattcgcctggcctcccaggccaacatagcccaggtgttggctgagctgaaggag
tacgccaccgaggtggacgttgactttgtgcgtaaggcagtgagggccatcggacgctgt
gccatcaaagtggagcaatctgctgagcgctgtgttagcaccctgctggacctcatccag
accaaggtgaactatgtggtgcaggaggccatcgtggtcatcagggacatcttccgcaaa
taccccaacaagtatgagagcatcatcgccacactgtgtgagaacctggactctctggac
gagccagatgcgcgcgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgccgacgaactgctggagagcttcctggagggcttccatgacgagagcacgcaggtc
cagctcactcttctcacagccatcgttaagcttttcctcaagaagccctctgagactcag
gagctggtacagcaggtcctcagtctggccacacaggactccgacaaccctgacctgcgt
gacaggggttacatctactggcgcctgctgtccaccgacccggtgactgccaaggaggtg
gtcttgtccgagaagcccctgatctcggaggagacagacctgattgagcccaccctgctg
gacgagctcatttgccacattggctccctggcctccgtctaccacaagccccccaacgcc
ttcgtggagggaagccacggcatccatcgcaagcacctgcccatccagcacggcagcatt
gacacaggcgagagccctgtgagcgcagggccagcagcccctattgaacaggcccagtca
gtcatcccctcccagggagacctgctgggagacctactcaacctggacctgggtcccccc
gtcaacgtgccccaggtctcctccatgcagatgggtgctgtcgacttgctgggcggaggc
cttgacagcctgctcgggggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaactttatcccctcgtcagttcccaacacgttcgccccatcgccgactcctgcagca
ctcagcagcggcctcaacgacctgtttgagctctccacaggcatggccatcaccacagga
ggctatgttacccccaaatctgtatggctgcctgcagtgaaagcgaaaggactggagatc
tcaggcacattctcccgccgacagggccaaatgtacatggacatgaccttcaccaacaag
gccttgcagcacatgaccgacttcgctatccagttcaacaagaacagtttcggagtgatc
cccaccacacctctgcccatccacactccactgatgcccagccagagtattgacgtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaacctacaggtg
gctgtgaagaacaacattgacgtcttctacttcagcgggcttatcccactcaacatcttc
tttgtggaggacggcaaaatggagcgacaggtgttcttggccacctggaaagacatcccc
aatgagaacgagctgcagtaccagattaaggagtgccacttaaacgcagacacggtgtcg
gggaagctgcagaacgacaacatctacaccatcgccaagaggaacgtggagggccaggat
atgctctaccagtccctcaagctcacaaatggcatctggatcctggctgagctccgcatc
caacctggcaaccccaactacacgctgtccttgaagtgcagggctcctgaggtgacccag
tatgtctaccaggtgtacgactcagtcctgaagaactga
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