Coregonus clupeaformis (lake whitefish): 121579416
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Entry
121579416 CDS
T08357
Name
(RefSeq) delta-sarcoglycan
KO
K12563
delta-sarcoglycan
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121579416
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_1
DUF2345
DUF1523
Motif
Other DBs
NCBI-GeneID:
121579416
NCBI-ProteinID:
XP_041749932
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Position
13:complement(19565815..19852594)
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AA seq
290 aa
AA seq
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MTQEQCTHRNNVQSSAKPHVYKVGIYGWRKRCLYFFVLLLMILILVNLALTIWIVKVMNF
TIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGSPLFLQSSKNVSVNILNGKNQLV
TQLIAGSSGVRARGKMLEVKSSTGKLLFSADDQEVVVGAERLRVTGAEGAVFTNSVETPH
VRAEPFKELRLESPTRSLYMEAPKGIQILAEAGDIQATCRSDLRLESKDGEITLDARRIR
LLRLPEGKASPSGTTTRQTVYEVCVCPNGKLFLSQAGTGSTCQISNNVCL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaacagtgcactcataggaacaatgtccagagctcagcgaaaccacacgtg
tacaaagtggggatttacggctggcggaaacgttgcctttacttctttgtactcctgtta
atgatcctgatcctggtcaacctcgctttaaccatctggatagttaaggtcatgaacttc
accatagatggtatgggcaacttaagaataacggagaagggtctgaaactggagggggac
tctgagtttctccaacctctgtatgccaaagaaattcagtccagaccaggcagcccactg
ttcctgcagtcctccaaaaatgtgtccgtcaatatcctaaatggaaagaatcagctggtc
acacaacttattgcaggatccagtggagtgcgtgcacgagggaagatgttggaggtgaaa
tccagcacagggaagctactgttctctgctgatgaccaggaggtggtggtgggagcagag
aggctacgggtgacgggtgccgagggagccgtgttcaccaactctgtggagacgccacac
gtcagggccgagcccttcaaagagctacgcctggagtctcccacgcggtctctgtacatg
gaggcccctaaaggaatccagatcctagcagaggcaggggacatccaggccacgtgtaga
agtgacttacgcctggagtccaaagacggagagatcactctggacgcgcggaggatcagg
ctgctgcgtctgcctgagggcaaggcctctccctcgggaaccactaccagacagactgtc
tatgaggtgtgtgtctgtcccaacgggaaactcttcctctcacaggccgggacaggctcc
acctgccagatcagcaacaatgtctgcctctag
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