Coregonus clupeaformis (lake whitefish): 121579419 Help Entry 121579419         CDS       T08357                                  Name (RefSeq) gem-associated protein 5   KO K13133   gem associated protein 5 Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cclu03019]     121579419    03041 Spliceosome [BR:cclu03041]     121579419 Messenger RNA biogenesis [BR:cclu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      121579419    mRNA cycle factors     P-body specific factors      121579419 Spliceosome [BR:cclu03041]  Other splicing related proteins   Proteins involved in snRNP biogenesis    SMN complex factors     121579419 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GEMI5_RBS TPR_GEMI5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_HPS5 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_ACSF4 WD40_RFWD3 Tricorn_2nd MIOS_WD40 Beta-prop_NUP159_NUP214 TPR_IF140-IFT172 Motif Other DBs NCBI-GeneID:  121579419 NCBI-ProteinID:  XP_041749937 LinkDB All DBs Position 13:20185066..20204551 Genome browser AA seq 1492 aa AA seqDB search MSTNYFTMHERLLPASPNWYCSRCSDTNDKGILAFGAKNTIYLVDVRASSSTVVGELVGH RERVSGFSFCQHAGQSHNCASTSDDGTVKFWDTNEMVLVKEHKTHQNTITALHWSPGEKN LVVSGDEKGIVVCYWYNTGESQSFFPEPRNIFCLSCSPHNWHYVAVGYKDGMIVLIDISK KGEVVHRLRGHDDEIHALAWAPLPNEEVLYSRADDNTAETTNVMTEGKEKGCYLASGSKD QTIRIWSTLKGKGVMTMKLPFLKRRGTGVDPAVKERLWLTVHWPKGKPTQVVSSCFGGEL ILWDLTKGGKQKWSLLGTSSEGQNHSRIVFNMSSVCVQDNRELLLSTSMDREIKCWDLSS LDCCWTLPTLGGFVYTLTFSPVGMGCMALGVGDGMIRVWSTLSIQNKYDTKTFWQGIKSK VTALSWHPTKEGSLAFGTDDGKVGIYDAFSNKPPQVSSTYHRKTVYTLAWGPPVPPLSFG GAGDRLSYSLYSCAGEGLILQHDPWKLAGEATDIDRVIKDTNSIKHKLSPHTDLSWKPDG KVVAIGNEDGSIEVYQAPTLKLLCTIQQHHKIINVLRWHHDHSSLPELQYLLASGSSNAL VYVHDLRTVIETPPESPVVMTEAYRSLTGHTAKITGLAWSPHHDGRLVTVCYDGTAQVWD VQKEEGLCNYRGHRGRLLCVQWSPVDPDLVWTGADDFTVQEWAVSKQEFTKPPKAKKTLD QKAKLKAKKKKKTTGKGGAKAEESLSLNGEGNKGGASPAPGERPSDNEEEEEGGSETTSI SSVTVSSSSNQMDRPVMDKVQNGGKSLLTVKKEMKKVERTEVSLKKRKPRSMLPLSTSMD HRPREDLQQDCLNLATVRHSEAPPANCVPGLGDHIQLGLFADRDALYRMFQEEEEGHVEA GHYESAVYLRLWKGDITGALQVATEKGELSDHLLSVAPMAGYQVWLRTVEVYVKQLCLQE QFLKAASHLLSINKVYEAIDLLKSHQLYREAIALAKARLQPDDPVLKELYTTWAAVLEKD GHLSTAAKCYLAVDSSFDAAKVIAKKNDPISLKTASSLARIVGESDLSYSLSLRCAKDLA SSQDWLGAQQLLSTHESLLAHRLHYCTIELLTVSLTGTDVVTWTCSSIHPWSTPCKSEDG FLATLRAVWERGFAVSPSNPEKLKALHQQLKAIENPQTTPNVPMKQLLILLSLDLTLGAV SWLLGDWGAALEELLQGVARGNEAGHFSLMSETCRLLFPQGIDSISEHKKMVDPSDEKAL AAARSLEAFVCYQDLYHMWWSHSTNTAGAQRDMTNGLHSASKNHNNGLDGRVTDTPNGDG MGWCLSTQNGDVTKGVCVNACQVLLSEPHATCQATQRTIAEIKQRLASMVHQHSRTQETK ASPGEGQTERPTLAQGSTPTDSQESSDAGQGPDTESLPSLIAMVSEHHKELADIPDHVKE YPYPDVLECCLVLLYLSKSSALVPDHLKNEAVALFRKYGTPSLRKASQRFLS NT seq 4479 nt NT seq  +upstreamnt  +downstreamnt atgtcgactaattatttcacaatgcacgaaagacttcttccagcctctccgaactggtac tgttcgcgatgcagtgacacgaatgacaaaggtatattggcgtttggagctaaaaacacc atatatttggttgacgttagagcatcatcctctacagttgttggtgaactggttggtcac agagagagagtgtctggcttctcattctgccagcatgccggccaaagccataattgtgcc agtacctctgatgatgggactgttaaattctgggacacaaatgagatggtccttgtaaag gagcataaaactcaccagaacaccatcacagccctccactggtcccccggagagaagaac cttgtggtgtcaggggatgagaagggcattgtggtctgctactggtacaacactggtgaa tctcaaagcttcttccccgaaccaaggaatatcttctgcctgtcctgctcccctcacaac tggcactacgttgctgtggggtacaaagatggcatgattgtcctgattgacatcagtaag aaaggtgaggtggtgcatcgtctccgtggccatgacgacgagatccacgccctggcctgg gctccactgcccaatgaggaggtgctttacagcagggcagacgacaacacagctgaaaca accaatgtgatgacagaaggcaaagaaaagggatgttatcttgcatctgggagcaaggac cagaccataagaatctggagcacgctgaaaggcaaaggtgtgatgaccatgaagctacca ttcctgaagagaagagggacaggggtggatcctgcagtcaaggagagactctggctcact gtgcactggcccaaggggaagccaacgcaagtcgtgtcaagctgctttgggggtgagctg atcttgtgggacctcaccaagggaggcaagcagaagtggagcctgttgggaacatcgtca gagggccagaaccacagcaggatcgtgttcaacatgagctcagtgtgtgttcaggacaac agagagctcctgctcagcacctcaatggacagagagataaaatgctgggacctgtcgtcg ttggactgctgctggacccttcccaccctgggggggtttgtgtacacccttaccttctct cctgtgggtatgggctgcatggccctgggggtgggagacggcatgatccgcgtgtggagc accctctctatccagaacaagtatgacaccaagaccttctggcagggcatcaagtccaaa gtcacagcgttgtcctggcatccaaccaaagaaggatccttagcttttggaaccgatgac ggcaaagttggcatttacgatgctttctctaacaagccgcctcaggtatccagcacttat cacaggaagactgtgtacacattagcctggggacccccagtcccccctctgtcatttggt ggagcaggagaccgtctgtcctacagcctgtatagctgtgctggagagggcctcatccta cagcatgacccctggaaactggcgggagaggccacagacattgacagggtcatcaaggac accaacagcatcaagcacaagctgtcaccccacacagatctcagctggaaaccagatggt aaagttgtggccatcggcaatgaggacgggtccatagaggtgtaccaggctccgactctc aagctgctgtgtaccatccagcagcaccataagatcatcaacgtgctgcgctggcaccat gaccacagttccctgcccgagctgcagtacctcctggcctctgggtccagcaacgccttg gtctacgtccacgacctccgcactgtcatagagactcctccagagagtcccgttgtgatg acagaggcatatcggagcctgacgggtcacacagccaagatcaccggcctggcctggagc ccccaccacgacgggagactggtcaccgtctgttacgatggtacagcacaggtgtgggac gtgcagaaggaggaggggctgtgtaactacaggggccacaggggccggctgctgtgtgtc cagtggtctcctgtggacccggacctggtctggacaggagcagatgacttcactgtgcag gagtgggctgtgtccaagcaggagttcaccaagccccccaaagcgaaaaagacacttgac caaaaggccaagttaaaggccaagaagaagaagaagacaacagggaaaggaggagcaaag gctgaggaaagcttgtctctaaatggagaggggaataaaggaggggcgtccccggcacca ggagaaagaccgtctgacaatgaggaagaggaggagggggggagcgagaccactagcatc tcctcagtgacagtgtcttcatccagtaatcagatggacagaccagtgatggataaagtg caaaatggagggaaatccttactcactgtaaagaaagaaatgaaaaaagtggagagaaca gaggtgtctctgaagaagaggaagcctcgctccatgctgcccctcagtacgtccatggac caccgacccagagaagacctccagcaggactgtctcaacctggccacagtcaggcactct gaggcacctcctgccaactgtgtcccaggcctgggagatcacatccaactggggctgttc gcagacagagacgccctctataggatgttccaggaggaggaggagggccatgtggaggca ggtcactatgagtctgcagtgtacctgagactgtggaaaggtgacatcactggagctctg caagtggccactgagaaaggagagctgagtgatcacctgctctctgttgcacctatggct ggttaccaggtgtggctgaggacagtggaggtctatgtgaagcagctgtgtcttcaggag cagttcctcaaggctgcctcccatcttctctcaatcaacaaggtctacgaggccatcgac ctcctcaagtcccaccagctctacagggaggccatagccctggccaaggctaggctgcag ccagacgaccctgtgctcaaggagctctacaccacctgggcagccgtgctggagaaagac ggccacttgtctactgctgctaaatgttatctcgctgtggactccagcttcgacgcagcc aaagtcatcgccaagaaaaacgaccctatctcactgaagacagcctccagtctggcgagg atcgttggtgaaagcgacctgtcctattcactctccctgagatgtgccaaagacctggcg tcctctcaggattggctgggagcacagcaactcctcagcacacatgagagcctattggcc caccggttacattactgcactattgagttgctcactgtgagtctaacagggacagacgta gtgacttggacctgttcctccatccatccctggtctactccctgtaagagcgaagatggc ttcctggctaccctgagggctgtgtgggagagggggtttgctgtctcccccagcaaccca gagaaactcaaagctcttcaccaacaactgaaggccatagagaatcctcagacgacacct aacgttcctatgaaacagcttctgatccttctgtcccttgacctgaccctgggcgcagtg agctggttgctaggtgactggggggcggccctagaggagctgttgcagggcgtggccaga gggaatgaggcgggtcacttctcgctgatgtcagagacctgcaggctgctgtttcctcaa ggtatcgactccatctcagaacacaaaaagatggtggacccctctgatgagaaggccttg gctgcagctcggagcctggaggcatttgtgtgttaccaggacctctaccacatgtggtgg agccacagcactaacacagcaggagctcagagagacatgactaatggactgcactcagcc agcaagaaccacaacaatggattagacggccgtgttactgacactccaaatggagatggg atgggatggtgtctgagcactcagaatggagatgtgacgaaaggagtgtgtgtgaacgct tgccaggtgctgctgtctgagccccacgcgacctgccaggccacccagaggactatagca gagatcaagcagagactggcctccatggtgcaccagcacagccgaacccaggagactaaa gccagccctggggagggacagactgaaaggcccaccttggcccagggctccactcccaca gacagccaagagtccagtgatgcagggcaaggacctgacactgaatccttaccctccttg attgccatggtttctgagcaccacaaagagttggctgacatcccagaccatgtcaaagaa tatccatacccagatgttctggagtgctgcttagttcttctctatttgagtaagagttct gctcttgttcctgatcacctaaagaatgaagcagtggccttgttccgcaagtatggaact ccctctctccgcaaggcctcccagcgattcctatcttaa

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