Coregonus clupeaformis (lake whitefish): 121579501
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Entry
121579501 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579501
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
EARP complex
121579501
Endosome - Golgi transport
Tethering complex
GARP complex
121579501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
YxiJ
COG5_N
Vps53_N
DUF4239
Sec8_N
TMTC_DUF1736
IFT57
Motif
Other DBs
NCBI-GeneID:
121579501
NCBI-ProteinID:
XP_041750051
LinkDB
All DBs
Position
13:complement(41984727..41991314)
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AA seq
840 aa
AA seq
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MDGDISATAMATTPPDSDPARKRRVHGMLKLYYGLNEEGNTVDQAESLNPCDINGTHFDP
EVYLNKLRRECSLGELMDQESCMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFK
KMEDEMDCLSTNMAAITEFSAHISGTLQDQHAQITKLSGVHTLLRKLQFLFELPARLNKC
LELQAYAQAVSSHRRARCVLQQYSHMPSFRGIQDDCHAIMNKLAQELRQKFRDGGSSAMD
LSECVELLLQLDEPAEELCDKFLSHAQSRLEADLRRLEAELRPPLSSGPTSVIYPSTGPA
RRLSAAPTAGSPTDPTSPGNPFLSPSSRTDILEFIDRGCNEFVSSLCLVIASYQELFVNR
PQEGNLASKNIPQMAVGKLHAFVDALATRYFSLVERRIQEEKSVGDNSLLVRALDRFHRR
LQAVAKLLPGSAVPSQGTEIVVWAARERIKQYLAALQSFYLDSLTDVRQALAAPRLGGSS
AGGGSHLAGPATGKDAPASLPELVSSLSASILNQIKSVLASVHLFTAKDITFSNKPYFKG
EFCSQGVRESLVVNFIKFVCQSSRQFCETAGDRGGSTPPALLLLLSRLCLDYETSTISYI
LTLTDEQFLVQHHSPVTAVAALCGEAREAAQKLLNHYVKVQGLIISQMLRKSVETRDWVN
TIEPRNVRAVMKRVVEDTTSIDVQVGLLYEEGVRKAHSSDSSKRTFSVYSSSRQQTRYAP
SYTPSAPMDTSLLSNIHKLFSERIDIFSPVEFNKVSVLTGIIKISLKTFLECVRLRTFGR
YGLQQIQVDCHYLQMYLWRFVSDENLVHFLLDEIVGSTAHRCLDPAPMEQSVIEVICERG
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatatcagtgctacggctatggccaccacaccacctgactccgacccagcg
cggaagcgccgagtgcacggtatgttgaagctctattatggattgaacgaggaaggaaac
accgtggatcaagcagagtccctgaatccgtgcgatataaacgggacgcatttcgatcct
gaggtttatctcaataagcttaggagagaatgttcccttggagagctgatggaccaggag
agctgcatggtgaagcagatccgctccttggacagtgacatgcagacattggtgtatgag
aactacaacaagttcatctctgccacagacacaatcagaaaaatgaagaacgattttaag
aagatggaggacgaaatggactgtctctctactaacatggctgctatcacagagttcagt
gcacacatcagtgggactcttcaggaccagcatgcacagataaccaaactgtcaggagtc
cacactcttcttagaaagctgcagttcctgtttgagctgcctgccaggctgaataagtgt
ctggagctgcaggcctatgcccaggcagtgagctcccatcgtcgtgcccgctgcgtgctg
cagcagtacagccacatgccctccttcaggggtatccaggatgactgtcatgccatcatg
aacaagctggcacaagagcttaggcagaagttcagagatggtggttcgagtgcgatggac
ctttcagagtgtgtggagcttctgctgcagctggatgagccagcagaggaactctgtgac
aagttcctgagtcatgcacagtcacgactggaagcagacctccgacgactggaggcggag
ctaagaccaccattgtcctctggacccacatcagtgatatatccttccactggccctgcc
cgcagactgtcagctgcacccactgctggatctcccactgaccccacctctccaggcaat
cccttcctctctcccagctcaaggactgatattctggaattcatagacagaggttgcaat
gaattcgtcagcagcctttgcttggtcattgcctcgtaccaagagttgtttgtcaaccgt
ccacaagagggtaatctggcctccaaaaacatcccccagatggctgttggcaagctgcat
gctttcgtggatgccctggccacccgctacttctcactggtggagaggaggatacaggag
gagaagagtgttggagacaactctcttctggtccgggctctggaccgtttccaccgcagg
ctccaggccgtggccaaactgctacctgggtctgctgtgcccagccaggggactgagatt
gtggtgtgggcggccagggagaggatcaagcagtacctggcagccctgcagagcttctac
ctggacagcctgacagacgtgaggcaggccctagcagctcctcggctgggtggaagctca
gctggaggtgggtctcacctagcgggaccagccactgggaaagatgctcccgccagcctg
ccagagctcgtctcctctctgtctgcctccattctcaatcagatcaagtcagtgctggca
tcagtgcacctcttcacagcaaaggacatcaccttttccaataagccttacttcaagggg
gagttttgcagccagggtgtgcgtgagagccttgtggttaacttcattaagtttgtgtgc
cagtcctcacgtcagttctgtgagactgcgggagacaggggtggctctacaccccctgcc
ctcctactgctgctgtcacgcctctgcctggactatgaaacctccaccatctcctacatc
ctcaccctcacagacgagcaattcctcgtgcagcatcactctcctgtaactgcagtcgca
gctttatgtggagaggccagagaggcagcacagaagctactgaaccattatgtcaaggtt
cagggcctgatcatatcccagatgctgagaaagagtgtggagacacgagactgggtcaac
accatcgagccacggaacgtccgtgctgtgatgaagagagtggtggaggacaccacctct
attgatgtgcaggtgggtcttctctatgaggagggagtgaggaaagcccacagcagtgac
tccagcaaaaggaccttctctgtctacagcagctcaaggcagcaaacccgctacgctccc
agctacacacccagtgctcctatggataccagtctcctgagtaatatacacaagctcttc
tctgagcggatcgacatcttcagtcctgtggagtttaacaaggtctctgtgttgacaggg
atcataaagatcagtctgaagacattcctggagtgtgtccgtctgcgtacctttggtcgt
tatggcctgcagcagatccaggtagactgccactacctgcagatgtacctgtggcgcttc
gtctctgatgaaaatctggtccacttcctgctggacgagatagtgggcagcactgcccac
cgctgcctggaccccgctcccatggagcagagcgtcattgaggtcatctgtgagagaggt
taa
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