Coregonus clupeaformis (lake whitefish): 121579506
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Entry
121579506 CDS
T08357
Name
(RefSeq) leucine-rich repeat transmembrane protein FLRT1-like
KO
K16362
leucine-rich repeat transmembrane protein FLRT
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121579506
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121579506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
fn3
LRRCT
LRR_5
LRRNT
LRR_LRWD1
LRR_9
LRRCT_2
Fndc10
Motif
Other DBs
NCBI-GeneID:
121579506
NCBI-ProteinID:
XP_041750061
LinkDB
All DBs
Position
13
Genome browser
AA seq
695 aa
AA seq
DB search
MATEGVAELRDWLFLLMLCLTLLAEVLEVAAATAQGYDEEEDLVCPSVCRCDEDFIYCND
RGLSSIPPLPLSATVLYLQNNHIDNAGLPTSLERHLTIRVVYLYDNELDDFPMHLPPSLQ
ELHLQDNNIRTLPRATLARMPLLEKLHLDDNSVSTVSIEDKAFVDNPRLRLLFLSRNHLS
SIPSGLPGSLEELRLDDNRISTIPTHAFRGLSSLRRLVLDGNLLANQRIADDTFSRLSNL
TELSLVRNSLLTPPLNLPNAHLQRLSLQDNALIHMPRGSLDGMRRLQRLDLSGNNLTTLP
RGLFKDLDNLGQLLVRGNPWFCGCNLRWLHDWLHARGNSITVRGLTCQGPEKVRDMALKD
LTSQMEECEVTGVVPAGAGVGATGSGTRDSVGGVGGVAASSTTLSPPQGSLFTLRSKRPG
LGLPDSGLDYTLGSSGVGKSLALNVKPLTHDSIRVTWSVAQPTSSFRLSWLRLGTSAAMG
SITETLVRGDRREYLLTSLHPSSSYIICMVPLAASSRGKGAMAGGDPDSDEAPVCAKAET
SDPSQPDAGQEDNQDPEHMTTLPLAGIIGGATVIVSLALIFAIFCWYGHRARRLSSRDQY
SRGSSRKSYDDYIESGTKKDTTILEIRGPGFQMTPMATHQPLQPKPLREDYIIHTIFPSN
GTALYKGAHQVSNEGYSTNRGYRERGIPDIDYCYT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagggagtggccgagctgcgtgattggctgttcctgctcatgctctgcctg
actctgttggccgaggtgctggaggttgctgcagccacagcccaggggtacgacgaggag
gaagacctagtgtgcccctcagtgtgccgatgtgatgaggacttcatctactgcaacgac
cgtggcctgagctctatcccccctctgcccctctctgccactgtgctctaccttcagaac
aaccacatagacaacgctgggctccccacctccctggagcgacacctaaccatccgagtg
gtctacctgtacgataacgagctggatgacttccccatgcacctgcctccttccctccag
gagctgcacctgcaggataacaacatccggacgcttccccgcgccaccttggcccgcatg
ccactgctggagaaattgcacctggacgacaactctgtctccaccgtcagcatcgaagac
aaggccttcgttgacaacccgcggctgcgtctgctcttcctgtctcgtaaccacctgtcc
agcatcccctctgggctcccgggctctctggaggagctgaggctggacgacaaccgtatc
tccaccatccccacccacgccttccgcggcctctcctccctgcgacgtctcgtcctggac
gggaacctcctggccaatcagcgcatcgcagacgacaccttctcccgcctctccaacctg
acagagctttcactggtgcgtaactccctcctgaccccgccactcaacctgcccaacgcc
cacctgcaacgtctctccctgcaggacaatgctctgatccacatgccccgtggctccctg
gacggcatgaggaggctccagagactggacctgtctggcaacaacctgaccaccctgcct
cggggcctgttcaaagacctggacaacctgggacaactgctggtgcgggggaatccctgg
ttctgtggctgtaacctgcgctggctacatgactggctgcacgctaggggtaactccatc
acggtgaggggcctcacctgccaggggcccgaaaaggttcgagacatggccctcaaggac
ctgaccagccagatggaggagtgtgaagtcacaggggtagtgcctgccggggctggggtt
ggagccacaggcagtgggaccagagacagtgtgggtggagtaggaggggttgctgctagc
tccaccaccctttcccctccacagggctccctcttcaccctgcgctccaagcggcctggc
ctggggctcccagactctggtctagactacaccctgggtagcagtggagtgggtaagagc
ctggccctgaatgtcaagcccctgacccacgacagcatccgtgtcacctggagcgtggcc
cagcccacctcctcctttagactcagctggctgcggctaggcaccagcgctgccatgggt
tctatcacagagaccctggtgagaggagaccgcagagagtacctgctcacctccctgcac
cccagttccagctacatcatctgcatggtgcccctggcagccagctctcgggggaaagga
gccatggcaggcggagaccctgactcagatgaagctccagtgtgtgctaaagctgagaca
tcagaccccagtcagccagacgcaggccaggaggacaaccaggaccctgaacacatgact
actctgcctctggctgggatcattggaggagctacggtcatcgtttctctggccctcata
ttcgccatcttctgctggtacgggcatcgggccagacgcctgtcttctcgtgatcaatac
agccgtggcagctccagaaagagctacgatgactacattgagtcaggcacaaagaaggac
accaccatcctggagatccgaggcccagggttccagatgacacccatggctacccaccag
ccactgcagcccaagcccctccgggaggattacatcatccacactatattcccctccaat
ggcaccgccctctacaaaggtgcccaccaagtgtccaatgaagggtatagcaccaaccgt
ggctatagagaaagagggatcccagatatagactactgttacacgtga
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