Coregonus clupeaformis (lake whitefish): 121579514
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Entry
121579514 CDS
T08357
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121579514
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121579514
BRITE hierarchy
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
121579514
NCBI-ProteinID:
XP_041750083
LinkDB
All DBs
Position
13:complement(42546753..42592846)
Genome browser
AA seq
1277 aa
AA seq
DB search
MPSLIISHLLVIWLGVQRLAWCAERASTRERFKVVIAPLICKRICLKGQCQDTCEQGNNT
TLIGENGQSADTLTGPGFRVVVCPLTCMNGGVCSSRTHCLCPPGFTGRLCQFPLRQMPEA
QAARGNKQPVYTLSVLPDGQSQGEQAAMGRPQLAQTHSVFTLPLAQGAGHHSSEVQFNVR
VHHAHDTSVVIHPLDQSDSKPPHKTVTRLTPQTHKPRGRCFQETTPKQACSSTPLPVLTN
QEDCCGSVGNSWGQNKCYKCPKLPYAVVKLHTIIEDYGSTCPQGYKRLNSTHCQDINECT
MQGVCQNGECLNTQGSFLCACKPGFTLDRTRCVESPSPVEQGQCFLIVTEAGRCEHALPT
SLSQEMCCCTVGKAWGSNCERCPQDGTASFSKICPAGKGYFFHSVRETVAFPPQIHTSLE
QVPLKPDKSHKKDKVKPPEEPPETTTPMQLSPISTHGPHVPVIITKPTPPPIIRLNPGSD
PLEVAQTQVSPETDECRLNRNLCGHGECVNVHTGYKCECYAGYRLHPQRNACVDDDECDA
EPCGHSRGICINTEGSYRCRCLHGYKLLVYHGKLRCIDVNECSKPDICGQGGQCVNLPGS
YKCECQKGFRSKSQRQPACEDINECLDPSSCPNEQCENIPGSYECVPCSTGHQAQDGVCY
DVNECQKRGVCPNGRCENLPGTYRCLCNEGFLPAADSKDCRDIDECEDDRLCANGRCVNT
EGSFQCQCYPGYQRTQEGSHCEDVNECERPSNCQRGRCINSMGSYRCECQKGYMLVGGRR
CQDIDECATDRGLCQPHGVCENRQGSYVCVCKDGFILSEDKHSCEEIEVDVEDKKECYLN
LDDTVFCDSVLATNVTKQECCCSIGVGWGDHCEIYPCPVYHSSEFHSLCPVGRGFYHEEG
VTDYGLSVHRDIDECVLFSNEICKEGRCMNTQPGYECYCQQGFYYDSNLLECIDVNECHD
ESLCTNGQCKNTRGSFYCTCKSPWIYEASNKKCVIPTVAGVDECQDSLNCKNGHCVDTPG
SYYCICSPPWILATDRNSCVTPEEQADINECQDPSYCKNGRCVNTPGSFHCICTQPLTFS
AALKQCVYDDRTAAHKDVCFLQVDEDLICSHPRNGLVVTYSECCCHYGRGWGPECRTCPQ
RNSGIFNRLCEMHLETESDGEGDFLAAFANYNPGIEGDSSEEDSDECSCANGRCVRSYLG
TMCECNTGFRLDHSRTRCTDIDECAEPGVRVNPCKNARCVNTIGSFKCYCKNGFVPARRP
NMCVPGTKVQHVRTRAL
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgatcatttcccatctgctcgtcatctggctgggtgtccagaggctggcc
tggtgcgcagagcgcgcatccacccgtgagcgcttcaaagtggtcatcgcccctctcatc
tgcaagaggatttgtttaaaaggccagtgccaggacacctgtgagcagggcaacaatacc
acactgataggcgagaacggacagtcagcggatactctcacagggcctggattcagagtg
gttgtgtgtccactgacctgtatgaatggaggggtgtgcagctcgcggacccactgcctg
tgcccgccaggtttcactggtcgcctgtgccagttcccgctccggcagatgcctgaggcc
caggcggcgcggggcaacaagcaacccgtctacacgctgtcagtgctgccagacggccag
agccagggcgagcaggcggccatggggcgaccacagctggcacagacccactctgtgttc
acccttcccctggcacagggagcaggacatcactcatcagaagtgcagttcaatgtccgt
gtccaccatgcacacgacacatccgttgtcatccaccctctcgaccaatcggattcgaag
ccccctcataaaaccgtgacacgcttgacccctcagacacacaaacccagggggcggtgc
ttccaggagaccacgcccaaacaagcttgtagcagtacccctctccctgtactgaccaac
caggaggactgctgtggaagtgtcgggaactcctggggacaaaacaaatgttataaatgt
cccaagctaccatatgctgtagtgaagctgcataccatcatagaggactatggttccacc
tgccctcagggctacaagagactcaacagcacccactgtcaagacatcaacgagtgcacc
atgcagggggtgtgtcagaacggagaatgcctgaacacccagggtagtttcctgtgtgcc
tgtaagcctggcttcaccctggacaggactagatgtgtggagtctccgtctccggtggag
cagggtcagtgtttcctcatagtaacagaggcgggtcgctgtgagcacgccctacccacg
tccctgtcccaggagatgtgctgctgcaccgtgggcaaagcctggggctccaactgtgag
aggtgtccccaagatggcacggcctccttcagtaagatttgtccagcagggaagggctac
ttcttccatagtgtccgggagacggtggcgttcccacctcagatccacaccagcctggag
caggtccccctcaagcctgacaagagccacaagaaagacaaagtcaagcccccggaggag
cctccagagacaaccacacccatgcagctgtctcccatcagcacccacggcccccatgtc
cctgtgatcatcaccaagcccacccctccgcccatcattaggttgaacccaggcagtgac
cccctggaggtggcacagacgcaggtctcaccagagacagacgagtgcaggctgaacagg
aacctctgtggccatggggagtgtgtcaacgtgcacactggctacaagtgtgagtgctat
gctggctaccggctccaccctcagaggaacgcctgtgtggatgatgatgaatgtgacgct
gagccatgtggccacagcagaggaatctgcatcaacacagaaggctcctaccgctgccgc
tgtctccatggctacaagctcctggtgtaccatgggaagctcaggtgtatagatgtgaat
gagtgctccaagcctgacatctgtgggcaggggggtcagtgtgttaacctgccagggtcc
tacaagtgtgagtgtcagaaaggcttcaggagcaagtcacaacgccagccagcctgtgaa
gatataaatgagtgtctggaccccagcagctgtcccaatgagcagtgtgagaacatccca
ggctcctatgagtgtgttccctgctcaactggtcaccaggcccaggatggggtctgctac
gatgtcaatgagtgccagaagcgcggtgtgtgtccgaacgggcgctgtgagaacctccca
ggaacctaccgctgcctctgtaacgagggcttcctcccagcagcagacagcaaagactgc
agagacattgacgagtgtgaggatgacagactgtgtgccaacgggcgctgtgtcaacaca
gaaggctccttccagtgccagtgctacccaggataccagcgtactcaggagggcagccat
tgtgaagatgtaaatgaatgtgagcgtccctctaactgccagagggggcgctgtatcaac
agcatgggatcctaccgctgtgaatgtcagaagggttacatgctggtcggagggaggcgg
tgccaagacatagatgagtgtgcgacagacaggggtctgtgtcagcctcatggtgtctgt
gagaacagacagggctcctatgtgtgtgtgtgcaaagacggcttcatcctgtctgaggac
aagcacagctgtgaggagattgaggtagacgtggaggataagaaggagtgttacctgaac
ctggatgacacagtgttctgtgacagtgtcctggccaccaacgtcaccaagcaggagtgc
tgctgctccatcggtgtgggctggggagaccactgtgagatctacccctgccccgtctac
cactcatctgagttccactccctgtgtccagtgggcagaggtttctaccatgaggaggga
gtaactgactatggcctgtctgtccacagagatatcgatgagtgtgtgctgttctccaat
gagatctgtaaggagggccgctgtatgaacacacagcctggctatgaatgttactgccaa
cagggcttctactacgacagcaacctactggagtgcatcgatgtgaatgagtgccacgac
gagtctctgtgtaccaacggtcagtgtaagaacaccagaggctccttctactgcacctgt
aagtccccctggatctacgaagcctccaataagaagtgtgtcatccccacggtggcaggt
gtggatgagtgtcaggactcgttgaactgtaagaatggccactgtgtggacacccctgga
tcctactactgtatctgctctcccccctggatactggccaccgaccgcaacagctgtgtg
accccagaggagcaggctgatatcaatgagtgccaggacccctcgtactgtaagaatggg
aggtgtgtgaacacgcccggctcctttcactgtatatgtacccagcccctcaccttcagc
gcagcgctcaaacagtgtgtctatgacgaccgcacagcggcccataaggacgtgtgtttc
ctgcaggtggatgaggacctgatctgcagccaccccaggaacggtttggtggtcacctac
tctgagtgctgctgtcactatggccgtggatggggccctgagtgtaggacctgcccccag
agaaactccgggatctttaaccggctgtgtgagatgcacttggagacagagtctgatggt
gagggagatttcctggcagctttcgccaactacaacccaggtattgaaggggacagttca
gaagaggactcagatgagtgtagttgtgccaatggtcgctgtgtgcgttcctacttgggc
actatgtgtgagtgcaacacaggctttaggctggaccactcccgcacccgctgcacagat
attgatgagtgtgctgaaccaggggtccgagttaatccatgcaagaatgcccgctgtgtc
aacacgataggctcgttcaagtgctactgcaaaaatggctttgtccctgcacgaaggccc
aacatgtgtgtaccaggcacgaaggtccaacatgtccgtaccagggctctataa
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