Coregonus clupeaformis (lake whitefish): 121579532
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Entry
121579532 CDS
T08357
Name
(RefSeq) sialidase-3-like isoform X1
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00511
Other glycan degradation
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121579532
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
121579532
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
121579532
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
121579532
NCBI-ProteinID:
XP_041750135
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Position
13:43563505..43566491
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AA seq
408 aa
AA seq
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MGNTSSRSYFPGIKMQPAKTTLFKQEQTGTTYRIPALIYLKESQTFLAFAEKRSSPSDSD
AKSIVMRRGTQQNGSTQWSESLELLSACLPHHRTMNPCPVYEKNTKTIFLFFICILGNTT
EHHQICTGKNKAHLCYITSNDEGQSWSQTIDLTESVIGKTVRKWATFAVGPGHGIQMESG
RLIIPAYAYYIQFKCFSFPFPFTVQPHALSIYSDDFGQTWQMGRMLQGKSCECEMAEIID
HEGSSHLYCNARHRGHRVEALSESSGVYFDKPRLAPRLVEPCNGGCQGSVIGFPAPEQGE
EGVGGTTSSPLASDTQTWLLFTHPTNKRKRKDLGVYLNRSPLHTSCWDRPWIVHSGPSGY
SDLAYSEDTEHFACLMECGENSELEQIAFVSFPLSDVMQTIDVKENTF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggggaatacatcatcaaggagttatttcccaggaatcaaaatgcaacctgcaaaaacg
actctgttcaaacaggagcaaactgggacgacatacagaatcccagctctcatctaccta
aaagagagtcagacattcctcgcctttgcagaaaagcgctcttcccccagtgacagtgat
gcaaaaagtattgttatgagaagaggaactcaacaaaatggatccactcagtggtcagaa
tccctggagctgttatcagcatgtttaccacaccatcgcaccatgaacccctgcccggtt
tatgaaaagaataccaagactatattcctctttttcatctgcattttggggaacactaca
gagcaccatcagatctgtacaggcaagaataaggcccacctgtgttacatcaccagtaat
gatgagggccagagctggagccagacaattgatttgacagagagtgtgattggcaaaaca
gtcaggaagtgggctacatttgctgtgggaccaggccatggcattcaaatggagagtgga
agattgatcattcctgcctatgcctattatatccaattcaaatgcttctccttccctttc
cccttcacggtacagcctcacgctctctcaatatacagtgacgacttcggtcagacatgg
caaatgggcaggatgcttcaaggaaagtcctgtgaatgtgagatggcagagatcatagac
catgagggcagcagtcacctctactgcaacgcccgccatagaggccacagagtggaagct
ttgagtgagagcagtggggtttactttgacaagccccgcttggctccaaggttagtggag
ccgtgcaatggtggttgccaaggcagtgtgattggcttccctgcccctgagcaaggtgaa
gagggcgtgggtggtaccacatcatcaccactggcctcagacacgcaaacctggctactc
ttcacccacccgaccaataagaggaagaggaaagacttgggggtgtatttgaaccgttcc
ccactgcacacatcatgttgggaccggccctggatcgtccacagtggacccagtggctac
tcagacctggcctacagtgaggacactgagcactttgcttgcctgatggaatgtggggag
aatagtgagcttgaacagattgcctttgtgtcttttcccctaagtgatgtcatgcagacc
attgacgtgaaagaaaataccttctag
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