KEGG   Coregonus clupeaformis (lake whitefish): 121579540
Entry
121579540         CDS       T08357                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121579540
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121579540
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    121579540
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     121579540
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 Zeta_toxin AAA_18 KTI12
Other DBs
NCBI-GeneID: 121579540
NCBI-ProteinID: XP_041750156
LinkDB
Position
13:43709794..43719936
AA seq 888 aa
MSGINVKKLKVNELKEELQLRGLDTRGLKADLVVRLQSALEAEAAGEVDGPPSADVGEEG
DEQHNICGDAGDGDGHSDEVKDDGEEEQDIEDNEVQLVPQAEEKQFDEANGDGEQSEEDR
QDGAQMYGQVPAMGYGMVDFTEDVMKPQIPQACESDKRQEPQLAMPEPQVLEAEMEEPDM
EEPEMEDPVQPEPLESASIEPEAKPVEMPEIKTEEFVMKVELKKEQEQLKEEKEPQQPKA
HLSEPANEWEAEQATQAKTEDDRYSRKRPYDEGRGYGYYEHREERRARSPQPPAEEEEED
FDDTLVAIDTYNCDLHFKVSRDRYSGYPLTIEGFAYLWSGARVSYGVNKGRVCFEMKINE
EISVKHLPSSEPDPHVVRIGWSLDTCNTQLGEEPFSYGYGGTGKKSSKCKFEDYGEKFGE
NDVLGCYIDFDSGEEVEMAFSKNGKWLDVGFRVSREELAERPLFPHVLVKNCAIEFNFGQ
KEQPFFPLPEGYTFIQNVPLENRMRGTVGPATKADCELLMMVGLPASGKTTWALKHAEEH
PAKKYNILGTNTIMEKMKVMGLRRQKNYSGRWDVLIQQATQCLNRLIQIAARKKRNYILD
QTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANF
VLPEAGEFLDDVTFIELQREEADTLVKQYNEEGRKAGPPPDKRFDNRQGGFRGRGAPYQR
YDNRGGPQGGRGGYQSRGGPQGGNFRGGYNHGGYQQNRWGNNRDGAAGGQRGYNRNQQSG
VGYNQHRQGQYNKGATGSYSQGQPQTYNQGNYNQGYNYGSFSQYPGYSQSYSQTPAAAPA
ATGQTYNQQYQQYAQQWQQYYQNQSQWNQYYNQYGNYSQGSQGSQGTQ
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgagtggaatcaatgtgaagaagctcaaagtcaacgagctgaaggaggagcttcagctg
cgaggcctggatactcgtgggctgaaggcggatcttgtcgtaaggttgcagtcagcactt
gaggccgaggctgcaggtgaagtggacgggccaccgagtgccgatgttggagaggagggg
gatgagcaacacaatatttgtggagacgctggagatggtgatggccactccgatgaagtt
aaagatgatggggaagaagaacaagatattgaggacaatgaagtacagttagtcccgcag
gcagaagagaaacagtttgatgaggcgaatggtgatggtgaacagagtgaagaagaccgc
caggatggggcacagatgtatggtcaagtccctgcaatgggatatgggatggtcgatttc
accgaagatgtgatgaagccacagattccgcaggcgtgtgagtcagacaaaagacaagag
ccacagttagcaatgccagagccgcaggtgttagaagcagagatggaggaaccagatatg
gaagaaccggagatggaagacccagtgcaaccagaaccactggagtcggcatcaattgag
cctgaagcaaagcctgtggagatgcctgaaattaagacagaggagtttgtgatgaaagtg
gagttgaaaaaggagcaggagcagttgaaggaagagaaggagccacagcagccaaaggct
catctttcagagccagccaatgaatgggaggctgagcaggcgacccaggccaaaacggaa
gatgaccgatacagccgtaagaggccatacgatgaaggccgtggctatggatactatgaa
catcgggaagaaagaagggcacgttctccccagcctccagcagaggaagaggaagaagat
tttgatgacactcttgtggctattgatacttataattgcgatctgcacttcaaggtatcg
cgtgacaggtatagtggatacccgctcaccatcgaaggttttgcatacctgtggtcaggt
gcacgggtttcctatggcgtcaacaaagggcgtgtctgctttgaaatgaagataaacgag
gagatctctgtgaagcaccttcccagcagtgagcctgatcctcatgtagtgcgcattggc
tggtccctggacacctgcaacacacagctcggtgaagaaccattctcttatggctatgga
ggaactggcaagaaatcttccaagtgtaaatttgaggattacggggaaaagtttggtgaa
aacgatgtccttgggtgctacattgacttcgatagcggtgaggaagtggagatggccttc
tcaaagaacgggaagtggttggatgtgggcttccgtgtgtcacgggaggagttggctgag
cggccgctctttccccacgttcttgtgaagaactgtgccattgaattcaactttggccag
aaagagcagcccttcttccccctgcccgagggatacaccttcattcagaacgtccctctg
gagaacaggatgcggggaacagttgggcctgccaccaaggctgactgtgagctgttgatg
atggttggcctgcctgcgtctgggaaaaccacttgggccttgaagcacgcggaggagcac
cctgcaaagaaatacaacatcctgggcaccaacaccataatggagaagatgaaggtgatg
gggctgcggcgtcagaagaactattctggtcgctgggatgtcctgatccagcaggccaca
cagtgtctgaacaggctgatccagatcgctgcccgcaagaagcgtaactacatcctggat
cagacaaatgtatatggatcagcccagagacgaaaaatgcgtccttttgaaggttttcaa
cgcaaggctattgtaatttgtcccacggacgaggatttaaaagagcgaacgttaaagcga
actgatgaggaagggaaggatgttcccgatcatgctgtattagaaatgaaagccaacttt
gtgctcccagaagctggtgagtttcttgacgatgtgaccttcatcgagctgcaacgagaa
gaggctgacacgctggtaaagcagtacaatgaggagggccgcaaggccggcccaccccca
gacaaacgctttgacaaccgccaaggaggattccgtggtcgcggtgcaccttaccagcgc
tatgacaaccgtggtggcccccaaggtggaaggggaggctatcagagtcgtggtggaccc
caaggtggcaacttcagaggagggtataaccatggaggctaccaacagaaccgctggggg
aacaaccgtgatggtgctgcaggaggacaacgtggctacaaccgcaaccagcaatctgga
gtgggctacaatcagcaccgccaaggacaatataacaagggagcaactgggagttacagc
caaggacagccacagacatacaatcaaggcaactacaaccagggttacaactacggcagc
ttcagccagtacccaggttatagccagagctacagccaaactcccgctgctgctcctgct
gccactggacagacctacaaccagcagtatcaacagtatgcacagcagtggcagcagtat
taccagaaccagagccaatggaatcagtactacaaccaatatggtaactacagccagggt
tctcagggctcccagggcacacagtag

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