Coregonus clupeaformis (lake whitefish): 121579544
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Entry
121579544 CDS
T08357
Symbol
rfx7a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579544 (rfx7a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Other basic domains
RF-X
121579544 (rfx7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
121579544
NCBI-ProteinID:
XP_045079361
LinkDB
All DBs
Position
1
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AA seq
1439 aa
AA seq
DB search
MTEDQQPDQHPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQSNVDNILQDVEK
FTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRNHL
EEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCY
SGLRKKAFVHMPSLPNLELHKTGDGCEVLEPSGQLCSADEEVRSAACGLVCEWAQKVLSR
QFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLQFSAFAPTAEAHSFQPQVKT
LPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADVGTPGVGSITCRSPALLSPHP
TIGIVVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNISA
SPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHVTSVNVVKMTT
ISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRATT
TPTIDIKMMEGEAISEGSPALVASRLTMTEEAAGGQRAGGAVPRAASVPTPHTKGSLGLE
AMAGTKCNGKSSLSNNTVAATAGSNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLIAS
KSPRKRPGVGPESYPTPVKRVFISQQPVGGSDGYRHGIGAGVKKLPRAGTPVRPESAPAI
GKVTVKLNSTVPTRILSLSDSPIGTRGFQTVVKPQSSVQRRDTPTTMDTSSIGNVSAQLV
MHEIQHQQHMTGNMQAMPNNSALLEQSAVSDLRNTMWAGDQLEGGKQQHQAYAQQITEHK
QASTPIMEPMAMMGQAPASSQVSMQTDMDYFHFNDDDMTQDSIVEELVQMEEQMKLNSSL
QAFGADVTLQGHQSIMQGNMMSSNQTVTSYYQSVHSSTTPIHTPTPTPTPTSTSEMMGGG
QGLTRESPCSRIAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINSS
ITGYHDGSLVSSSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISILPSYQDLVD
DHFRKPHAFAIPGQSYQSQTRHHDGHYGRLTPISPVQQQAATMANLNKQEGFAVPAPLDN
KATSTSSAGGTFRCRSVSPAVRQRNLSGNHGLQNIPRTVVSPFTSPVTPEMINIIANSHG
DVSVSSMAQRSQSVPVNVMMQMEVLPMQGQNNSKKITNVLLSKMDGDSDDAVRGLGINNL
PSNYTARMNLTQILETTPSFPSSANHQRLXNAQNAYEFQKPGYLMKNSRNEQMILSAGDS
QAQSQQQQQQLDFSTTVKDLLADGSLTPGNQLVGQVSELNAVGSDFRLTSDLSSSINDLN
NLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICGETANSNGFDWLESKDQPTVGLMG
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacctgatcagcacccgaagctgggctctggaataagcacgtta
ccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaataaag
aattccatctgcaaatctgtacagtcaaatgtggacaatattttgcaagatgtggagaag
tttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaacagt
gaaaaaaggactgagagagggtctgccagtcctggagaactctcatgcagtgatcagagc
tccatgtcatcaagccgcactcagcagatgcacgcgttcaactggatccgcaatcaccta
gaggaacacccagaaacctctctgcccaaacaggaggtctatgacgagtacaagagctat
tgtgacaatctctgctaccacccactgagtgcggcggactttggaaagatcatgaaaaat
gtatttccaaacatgaaggcacgtcgacttggcatgagaggaaaatcaaaatactgctat
agtggactgaggaagaaagcctttgtccacatgccatctttacccaacctggagttacat
aaaacaggggacgggtgtgaggtgctggagccctcaggtcagctgtgcagtgcggatgag
gaggtgcgctctgcggcctgtggcctggtgtgtgaatgggcccagaaggtgctgagccgc
cagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactacatcggcacc
aaatctgtggcagccctcacggtcatgactggtacaccaacaggagttaaaacgccgctg
caattctcagcattcgcccccacagctgaagcccactccttccagccccaagtgaagacc
ctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaagcag
caggagcagatgctgcactcccccctccccggagaggctcaggccaggcgggctgacgtg
ggcacgcctggggttggctccattacctgtagaagcccagccctgctctccccacatccc
accattggcattgtggtagctgcagtccccagccccattacggtacagaggagcaggcag
ctgatgtcccccagtcctgtgggaacatcggagggcaagattctgcctgtcaacttccag
gtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaacatctcagcc
agccctgtcggggaccgctctgcccgacaccgctatgcccagatcctgcctaaaccctca
gctaccagcgccatcaccctgcgctcgccccccaccctgctcatcaccaacagccccatc
aagacggtgatgcagcccacgccccacgtcacctctgtcaacgtggtcaagatgaccacc
atatccctggctcccaactgcagcactacaaccaccctaaccaacaccaccttacggcct
gcctctgctggcatgggcagcactgtggccctggaggagagcaggcccagcccacgggcc
aggagtggctctgcagcccccatcctgtcccccttagccaggtcaggccgggccaccacc
acccctaccatcgacatcaagatgatggagggtgaagccataagtgagggcagcccggcc
ctggttgctagccggcttactatgactgaggaagctgcagggggccagagggctggaggg
gctgtaccaagggctgccagtgtgcccacacctcacactaaaggctccctgggactggag
gcaatggctggaaccaaatgcaacggaaagtcctctttgagcaacaacactgtggcagct
acagctggtagcaataacaccaataacgaaagcactttgtatttgacggtctccaatcag
aataccagcaccactctgtcacccaatggcggcactgttgctacatcactcatcgcctcc
aagagccccaggaagcgcccaggcgtcggcccagagtcttatcccacgcctgtcaaaagg
gtcttcatctcccagcagcctgttgggggctccgatggttacagacatgggattggtgca
ggagtgaagaaactccccagggcaggaaccccggtcagacctgaaagtgcaccagccatc
ggcaaagttactgtgaaactgaactccactgtcccaactcgaatcttgtcactctctgat
tcccccatcggaaccagaggcttccagactgttgtcaaaccacagagctccgtgcagaga
agagacactccgaccaccatggacactagcagcatcggcaacgttagtgcccagttggtc
atgcacgaaattcagcaccagcagcacatgacgggtaacatgcaagccatgcccaacaac
tctgccctactggagcagtctgctgtgagtgacctgaggaacaccatgtgggctggggac
cagctggagggaggtaagcaacagcatcaggcctacgcccagcagatcacagagcacaag
caggcatccaccccgatcatggagcccatggccatgatgggccaggccccagcctctagc
caggtctccatgcagacagacatggactacttccacttcaatgatgacgatatgacccag
gacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaacagtagtctg
caggccttcggagctgacgtgacgctgcaaggccatcagtctataatgcagggcaacatg
atgtcgtccaaccagacagtgacctcttactaccaatcagtacacagcagcaccaccccc
atccacacccccacccctaccccaactcccacatccacctctgagatgatgggaggaggc
cagggcctgaccagggagagcccctgctcccgcatagcccccaccaccccggtggacagt
gccctggggagcagccgacacacccccatcggcactccacactccaactgcagcggcagc
gtgccccccagccctgtggagtgcaggaacccctttgccttcacgcccattaactccagc
attacaggctaccacgacggcagcctcgtctccagcagccccgtcaagcccatgcagagg
cccatggctactcacccagacaaggccaaactggagtggatgaacaatggttacaacaac
agtggggggaactccatcaacggcatcagtatcctccccagctatcaggacctggtcgac
gaccacttccgaaagccccatgccttcgccatccctggccagtcctatcagtctcagacg
aggcaccatgatggacactacggccgtctgacacccatctctccggtgcagcagcaggca
gccactatggccaacctgaacaagcaggagggctttgctgtgcccgcccctctggacaac
aaggccaccagcacatcctcagcaggcgggaccttccgctgtcgtagtgtgagccctgcc
gtgcgccagcgaaacctgagtggcaaccacggcctgcagaacatcccccgaacagtggtg
tcccccttcacctcccctgtgacccccgagatgatcaacatcatcgccaacagccatggg
gacgttagtgtcagcagcatggcacagaggagccagtctgtgcctgtcaacgtgatgatg
cagatggaggtgctgcccatgcagggccagaacaacagcaaaaagatcaccaacgtgctc
ctgagcaagatggacggggacagtgacgacgcggtgcggggccttggcatcaacaacctg
ccgtccaactacacagcccgcatgaacctcacccagatcttggagaccacgcccagcttc
cccagcagtgccaaccaccagagacttnccaatgctcagaatgcgtacgaatttcagaag
cccggttacctcatgaagaactcaaggaacgaacagatgattctctcagcaggtgacagc
caagcacaatcacaacaacagcagcagcagctagatttcagcaccaccgttaaagacctc
ttagcggacggcagccttactcctggcaatcagctcgtgggacaggtgtcagaactcaac
gctgtggggtctgattttcgactgacctctgacctttccagtagcatcaatgacctgaac
aatttggacacaaaccttctgtttgaccccaatcagcagcagggacaatatgaagactct
acactggaggaactgaagaatgatccgctgttccagcagatttgcggcgagactgcgaat
tccaatggatttgattggctggaaagtaaagaccagcccacagtcgggttaatgggttaa
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