KEGG   Coregonus clupeaformis (lake whitefish): 121579549
Entry
121579549         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: desmin
  KO
K07610  desmin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519  Cadherin signaling
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    121579549
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121579549
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121579549
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     121579549
SSDB
Motif
Pfam: Filament Filament_head DUF8429 ZK652 ANG-1 KIF21A_4th Mua COLEC12 DUF7491 CCDC89 TolA_bind_tri DUF1664 CLIP1 WXG100 DUF7432 Baculo_PEP_C GeBP-like_DBD
Other DBs
NCBI-GeneID: 121579549
NCBI-ProteinID: XP_041750181
LinkDB
Position
Unknown
AA seq 483 aa
MTSYRSSAQSAQSGTSSYRRTFGAGYSPAMSHSLYSSGARAGASDSDMAARPHLLPGLTV
TKTSASPAYSXYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLAGALNQEFLHTRTNEK
VELQHLNDXFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVEAL
TNQRSRIEVERDNLGEDLDKIKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERRI
ETLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKNI
SEAEEWYKSKVTDLNQAVNKNNEALKQAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQM
REMEERHGREAGGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKLL
EGEESRISLPIQNYSTMTFRETSPEHHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQQ
DLM
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgacctcctaccgctcttctgctcagtcggcccagtctggcacctcatcctaccgccgc
acctttggcgcagggtacagccctgccatgtcccattccctctacagcagcggggctcgg
gcgggggcctcggactcggacatggcggctcggccacatctcctcccgggtctcacggtc
accaagacctccgcctcgcccgcttactccngctaccgcacctcgtctcacttcggcgga
cctgtgatgtcatcgaccgcacacggttcacggtcatacgcagggatgggggagacactg
gacttcagcctggccggcgcgctgaaccaggagttcctccacacacgcaccaacgagaag
gtcgagctgcagcacctgaacgacngcttcgccagctacatcgagaaagttcgcttcctg
gagcagcagaacgctacattggtggtggagatcgagaggctgcgggggcgcgaacccaca
cgcatcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggaggcctta
accaatcagaggagccgcatcgaggtggagagggacaacctgggcgaagacttggacaaa
atcaaactaagactgcaggaagagatccttcagagggaggatgcagagaacaacctggct
gctttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgcatt
gagaccctacaggaggagatcgccttcctcaagaagattcacgaggaggagatccgtgag
atgcagtcccagatgcaggagacccaggtgcagatccagatggacatgtccaagccggac
ctgacagctgccctcagggacatcagggcccagtatgagggcatcgcggccaagaacatc
tcggaggctgaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaacaag
aacaacgaggctctgaagcaggccaagatggagaccatggagttcaggcaccagctccag
tcctacacctgtgagattgactcacttaaaggcaccaacgagtctctgatgaggcagatg
agagagatggaggagcgccacgggcgggaggcgggtgggttccaggacaccatctcccgt
ctggaggctgagatcgccaacatgaaggatgagatggccaggcacctgagagagtaccag
gacctgctcaacgtcaagatggccctggatgtagagatagcaacctacaggaaactgctg
gagggagaggagagcaggatttcccttcccatacagaactattccaccatgactttccgt
gaaacaagcccagagcatcatcatcgcgttgctgagtcacactcaaagaaaagtgtcctt
atcaagaccatcgagacccgcgacggagaggtggtctctgagtcaacacagcaccagcag
gatctgatgtaa

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