Coregonus clupeaformis (lake whitefish): 121579549
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Entry
121579549 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: desmin
KO
K07610
desmin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121579549
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121579549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121579549
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121579549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF8429
ZK652
ANG-1
KIF21A_4th
Mua
COLEC12
DUF7491
CCDC89
TolA_bind_tri
DUF1664
CLIP1
WXG100
DUF7432
Baculo_PEP_C
GeBP-like_DBD
Motif
Other DBs
NCBI-GeneID:
121579549
NCBI-ProteinID:
XP_041750181
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MTSYRSSAQSAQSGTSSYRRTFGAGYSPAMSHSLYSSGARAGASDSDMAARPHLLPGLTV
TKTSASPAYSXYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLAGALNQEFLHTRTNEK
VELQHLNDXFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVEAL
TNQRSRIEVERDNLGEDLDKIKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERRI
ETLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKNI
SEAEEWYKSKVTDLNQAVNKNNEALKQAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQM
REMEERHGREAGGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKLL
EGEESRISLPIQNYSTMTFRETSPEHHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQQ
DLM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctaccgctcttctgctcagtcggcccagtctggcacctcatcctaccgccgc
acctttggcgcagggtacagccctgccatgtcccattccctctacagcagcggggctcgg
gcgggggcctcggactcggacatggcggctcggccacatctcctcccgggtctcacggtc
accaagacctccgcctcgcccgcttactccngctaccgcacctcgtctcacttcggcgga
cctgtgatgtcatcgaccgcacacggttcacggtcatacgcagggatgggggagacactg
gacttcagcctggccggcgcgctgaaccaggagttcctccacacacgcaccaacgagaag
gtcgagctgcagcacctgaacgacngcttcgccagctacatcgagaaagttcgcttcctg
gagcagcagaacgctacattggtggtggagatcgagaggctgcgggggcgcgaacccaca
cgcatcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggaggcctta
accaatcagaggagccgcatcgaggtggagagggacaacctgggcgaagacttggacaaa
atcaaactaagactgcaggaagagatccttcagagggaggatgcagagaacaacctggct
gctttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgcatt
gagaccctacaggaggagatcgccttcctcaagaagattcacgaggaggagatccgtgag
atgcagtcccagatgcaggagacccaggtgcagatccagatggacatgtccaagccggac
ctgacagctgccctcagggacatcagggcccagtatgagggcatcgcggccaagaacatc
tcggaggctgaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaacaag
aacaacgaggctctgaagcaggccaagatggagaccatggagttcaggcaccagctccag
tcctacacctgtgagattgactcacttaaaggcaccaacgagtctctgatgaggcagatg
agagagatggaggagcgccacgggcgggaggcgggtgggttccaggacaccatctcccgt
ctggaggctgagatcgccaacatgaaggatgagatggccaggcacctgagagagtaccag
gacctgctcaacgtcaagatggccctggatgtagagatagcaacctacaggaaactgctg
gagggagaggagagcaggatttcccttcccatacagaactattccaccatgactttccgt
gaaacaagcccagagcatcatcatcgcgttgctgagtcacactcaaagaaaagtgtcctt
atcaagaccatcgagacccgcgacggagaggtggtctctgagtcaacacagcaccagcag
gatctgatgtaa
DBGET
integrated database retrieval system