Coregonus clupeaformis (lake whitefish): 121579580
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Entry
121579580 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579580
04121 Ubiquitin system [BR:
cclu04121
]
121579580
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121579580
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121579580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
BTB_KLHL33
zf-C2HC_2
zf-C2H2_15
zf-C2H2_2
zf-Di19
Zf-C2H2_ZNF451_2nd
BolA
zf-met
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
121579580
NCBI-ProteinID:
XP_041750238
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Position
13:44798522..44831666
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AA seq
682 aa
AA seq
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MTECIHNINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEVPSVVSVQSIQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGLAGPGGFPVNPGDSGQETPRGTPESGTSGPSSDAESGYMQATSQQSLERAYTSLY
SYSGLSLQNGTRERSHYVTSMTTSYDPALSTQKDQHDPPWITRIHERSQQMERFLSTPET
THCRKQPRPVRIQTGGIHIKQEAEDEYSSYGMDECTEDTDHVEGVESEPKGESFDSGVSS
SIGTEPDSVDQQQYLVGFGREGGGEGQQCEGTPVQIEVNDSSPEQMHEMDDRGTSHNTSD
SNMLQPLPNPIMAQSLPSAPLYMCQAETHTSNLRMPLTMTSNTQVMGTAGNSYLPNLFAT
QSASNNKPFLFSLPQSMGGQQPQFVAVPPPSMPPFPQQLMVQQHAAREQQQAAQMGQGEK
KPYECTLCTKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQ
CSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSTVGAITGLSG
AAGAGGPVSIPMAVPEPGAGVVALAMPVSGGAGIGGGVGTGVGVAAEASCQEGTTYVCSV
CPAKFDQIEHFNDHMRMHVSDG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtgcattcataacatcaatctccacaacttcagcaattctgtacttgagacc
ctcaatgagcagcgcaaccgcgggcacttctgtgacgtgactgttcggatccatggaagc
atgctgcgagcccaccggtgcgtgctggccgctgggagccccttctttcaggacaagctg
ctcctcggctacagtgacattgaggtcccctctgtagtctcggtgcagtccatccagaag
ctgatagacttcatgtacagcggggtcctgcgggtgtcccaatcggaagctctccagatc
ctcactgctgccagcatcctgcagatcaagacggtcatcgatgagtgcacccgcatcgtg
tcccagaatgtgggcctggccgggccaggggggttccctgtcaacccaggggactctggg
caagagacgccccggggcacgcctgagtcaggcacctctgggcccagcagcgatgcagag
tcagggtacatgcaggccacgtcccagcagagccttgagcgtgcctacacatcgctgtac
tcctactctggcctttcattgcagaatggaacccgtgagcgctcccactacgtaaccagt
atgacaacaagctacgacccagccctcagcacgcagaaggaccagcatgacccgccatgg
atcacccgcatccatgagagatcacagcagatggaacgcttcctatccactcctgagacc
acccactgccgcaagcagccccggccggtacgcatacagacaggaggtattcacataaag
caggaggcagaggacgagtacagcagctatggtatggatgagtgcacagaagacactgac
cacgttgagggtgtggagagtgaaccgaagggtgaaagctttgactcaggggtaagctcc
tccatcggtactgagccagactccgtggatcagcagcagtacctggttggctttgggagg
gaagggggtggagaggggcaacagtgcgaggggaccccagtgcagatcgaggtcaatgac
tcctccccagagcagatgcatgagatggatgacaggggcacatcccacaacactagcgac
agtaacatgttgcagcccctgcccaacccaatcatggcccagtccctgccaagtgcccca
ctctacatgtgtcaggccgaaactcacaccagcaacctgaggatgccgctcaccatgacc
agcaacacccaggtaatgggcacagccggcaactcctacctgcccaacctctttgccaca
cagtcggccagcaacaacaagcccttcctcttcagcctgccacagtccatgggaggccag
cagccccagtttgtggccgtgccgccccctagtatgcccccattccctcagcagttgatg
gtacagcagcatgcagcgcgggaacagcagcaggcggcccagatggggcagggggagaag
aagccctatgagtgcactctctgcactaaaacctttactgctaaacagaactatgtcaaa
cacatgtttgtgcacactggtgagaaaccacatcagtgcagcatctgctggcgctcgttc
tccctgaaggattacctaatcaaacacatggtcactcacacaggggtacgtgcctaccag
tgcagcatctgtaacaaacgcttcacccaaaagagctccctcaacgtccacatgcggctg
caccgtggagagaagtcctacgagtgctacatctgcaagaagaagttctctcacaagacc
ctgctggagagacatatggctctgcacagcacagtgggcgccatcacggggctgtcggga
gcagcaggcgccggtggccctgtctccattcccatggccgtgcccgaacccggcgccgga
gttgtggccctcgccatgcccgtcagcggaggcgccggaatagggggtggggtcggaaca
ggagtgggtgtggctgcggaagcaagctgccaagaagggaccacctatgtgtgctccgtc
tgccctgccaagttcgaccaaattgagcacttcaatgaccacatgcgaatgcacgtctcc
gatggataa
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