Coregonus clupeaformis (lake whitefish): 121579613
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Entry
121579613 CDS
T08357
Name
(RefSeq) ras and Rab interactor 2-like
KO
K17638
Ras and Rab interactor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579613
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121579613
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
121579613
NCBI-ProteinID:
XP_041750287
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Position
13:46227093..46232623
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AA seq
815 aa
AA seq
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MQEDPVYDFPEPVGGEPVGERRACPQRGSLKNISVLDRLLLTHPVWLQLSINSATALHIL
QREPPGIFLVRKSNTSQKKVLCVRLADDSVPSFVKQFVIREGDSTFSLERAAIGFPDLFR
LIAFYCVSRDVLPFPLELPEAIVKASSHKQLESISHMGVEFWSSQLNFRGPRNGPPPVEE
APLPPSPTPEDCATPQESPTLFQEFCPIQTRSPRELNCGAAGQGALCFINPLFLQSQPAL
HKRLQFKRSLKVRVSTENSSSLSPPVAPPPPPPLLAKKNIKSKVQQASRAVEGERGTAPV
QEDSDYLHPCLVLPFLPQKTRVTPTLSPTAEEDYHVPLALLQGPAQEKGGEEVGLLLEQR
YAPSLSELDSSSSLSSLEEAEESSERPPLTRGTSNPSPPCTLPPRQPVSVLRKLSAAFVS
FFMPEKHVARLVEDLSRDRRTVFGVLVQDFLRQQREAIKPQCQRSGVELLQGIRLFLSQA
KTFLLDCGELEPPIETMVPDDEKDLVLEKAMFRCVLKPLKGQIDRTLKTLHERDGSTQSM
AESLAVARGKTPLECFGVRVGVPDAAGVEKVRQKLALMRRAYSPIDKVAVLLQVCKLIYK
AMTDNSGQEFGADDFLPALSYVIVQCNMPELSVEVEYMMELLESSWLTGEGGYYLTSVYA
SLCLIQSQPEEMPSSGLTQEARDSLKDWSQRRSSQAQSQKNIQQQLRCVKVLFQDGESSW
MKTLQWRAGVSGEALTQLCAAKFGVDNPGLYKLYWRSEGEIQALPAQGQIQDLQGQGTSG
TPLIYQLANQDGLKTCKLTREEAVDLVESPGVSTR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggacccggtgtatgatttccctgagccggtagggggggagccggtaggagag
aggcgggcttgtcctcagcgtggctccctgaagaacatcagtgtgcttgaccgtctgctt
ctcacacaccccgtctggctgcagctgtccattaactctgccaccgctctgcacatccta
cagagggagccgcctggaatctttctggtgcgcaagtccaacacctcgcagaagaaagtg
ctgtgtgtcaggcttgcagacgacagcgttccctcctttgtcaaacaatttgtcatccgc
gaaggggactctaccttctctttggagagagcggctatcggtttccctgacctcttccgg
ctcattgccttctactgtgttagccgggatgtgttgcccttcccactggagctccctgag
gccatagtcaaggcttcatcccacaaacagctggagtccatctcacacatgggcgtggag
ttctggagctcccagctgaacttcagaggtccacgcaatgggcccccaccagtcgaggag
gcaccgctgccacctagccccacccctgaggactgtgccacgccacaggagagccccacc
ctgttccaggagttctgccccatccaaacacgcagcccccgggagctgaactgtggggca
gcaggccaaggggctctctgtttcatcaacccactcttcctgcaatcccagcctgcactg
cacaaacgcctccagttcaagcgcagcctcaaggtgcgtgtctccactgagaactctagc
tccttgtccccaccagttgcccctccccctcccccacctctgctggccaagaaaaatatt
aaaagcaaggtccagcaggccagtagagcagtggagggtgagagagggacagcacccgtc
caggaggactcagactatttgcatccatgcttggttcttccatttcttccgcagaagacc
agggtcacacccacactgtctcccactgcagaggaggactaccatgtgcccttagctctc
ctgcagggaccggcccaggagaaaggaggtgaggaggtgggtctcctgctggagcagaga
tatgctccctccctgagtgagctggacagcagtagttccctcagcagcctggaggaggca
gaggagagctcagagcgacctcccctcaccaggggcaccagtaacccctcacccccatgc
accttgcccccacgccagcccgtctcagtcctgcgcaagctgagtgcagcctttgtgtcc
ttctttatgccagagaagcacgtggcgaggctggtggaggacctgtcccgtgacaggagg
actgtgtttggtgtcctggtgcaggacttcctcaggcagcagcgagaggcgatcaagcct
cagtgccagagatctggcgtagagctactgcagggcatccgcctcttcctctcccaggcc
aagaccttcctgctggactgtggagaactagagccccccattgagaccatggtgcctgat
gatgagaaagacctggtgctggagaaagccatgttccgctgtgtgctgaaacctctgaag
ggacagatagacaggacactgaaaactctgcatgagcgagatggctccacccaaagcatg
gcagagagcctagctgtggccaggggaaagaccccgttggagtgttttggagtgcgggtg
ggagtgccggatgctgccggtgtggagaaggtgcggcagaagttagctctcatgaggcgg
gcttactctcccattgacaaggttgctgtgctcctgcaggtctgcaagctcatctataaa
gccatgacggacaattcaggccaggaattcggtgcagatgacttcctaccagccctgtcc
tatgtcatcgtacagtgtaacatgccagagctgtctgtggaggtggagtacatgatggag
ctgctggagtcatcatggctgacaggggagggtgggtactacctgaccagtgtgtatgcc
agcctgtgcctgatccagagccagcctgaagaaatgccctctagcgggctgacccaggag
gccagagactccctgaaagactggagccagcgccggagcagccaggctcagagccagaaa
aacatacaacagcaactgaggtgtgtcaaggttctgtttcaagatggagaaagcagttgg
atgaaaaccctgcaatggagggcaggagttagtggggaggccctgacccagctctgtgct
gctaagtttggtgtggacaacccaggactgtacaagctgtactggcggagtgagggggag
attcaagccctcccagcccagggccagatccaggacctacagggccaaggcaccagcgga
acacccctcatataccagctagccaaccaggatggactcaagacttgcaaactaacaaga
gaggaggctgtggaccttgtggaatcacctggagtatccacacgttaa
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