Coregonus clupeaformis (lake whitefish): 121579655
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Entry
121579655 CDS
T08357
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121579655 (cdx1b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121579655 (cdx1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121579655
NCBI-ProteinID:
XP_041750372
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Position
13:complement(47474928..47480726)
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AA seq
252 aa
AA seq
DB search
MYVSYLLEKEPSMYPNSVRHPSLNLNHQNFVPAPPQYSDFSGYHHVAGINNDPHHSQTGA
WNPAYPPSREEWSPYGPGTGPSTSNPGPIGYSPPEFSPVPQPGLLPSINSSVGQLSPNSQ
RRNPYDWMRRSTPPANSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATS
LSLSERQVKIWFQNRRAKERKVNKKKMQQPQPASTTTPTPPGSGMPGNVAMVTSSSGGLV
SPSIPMTIKEEY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggaacccagcatgtacccaaattcagtgcgacat
cccagcctaaacctgaaccatcagaactttgtgcccgcacctccacagtattcggatttc
agcggataccaccacgttgctgggattaacaatgaccctcaccacagccagactggggcc
tggaaccctgcttacccgccgagccgggaagagtggtcaccctatgggccggggacagga
ccgtccacatctaatccgggaccaatagggtatagtcccccagagttctctccagtccca
caacccgggcttctcccatccatcaactcatctgtagggcagctgtctcccaattctcag
cgcagaaacccttatgattggatgaggcggagcacaccaccggcaaattcaggtggtaag
acaagaacgaaagacaagtaccgggtggtgtacacagatcaccagcggttggagctggag
aaggagttccactacagccgctacatcaccatcaggaggaaagcagagctggccacctct
ctcagcctctcagaacgacaggtgaaaatctggtttcagaatcggcgtgccaaagagagg
aaagtgaacaagaagaagatgcaacagcctcagcctgcgtccacaacaacccctactccc
ccaggctctggcatgcctggcaatgttgccatggtgaccagcagcagtggcggcttagtg
tctccgtccataccaatgactatcaaggaagaatactga
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