Coregonus clupeaformis (lake whitefish): 121579657
Help
Entry
121579657 CDS
T08357
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1 isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121579657
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121579657
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121579657
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121579657
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121579657
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121579657
CD molecules [BR:
cclu04090
]
Proteins
121579657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
Ig_4
SpaA_4
Motif
Other DBs
NCBI-GeneID:
121579657
NCBI-ProteinID:
XP_041750375
LinkDB
All DBs
Position
13:47520968..47538905
Genome browser
AA seq
988 aa
AA seq
DB search
MFFLALFIGIMVCCTAQERSPPVIKLNSVVLREAEWTMPVGTSSFTLTCEGNSTVTWSTT
AFKLKRSTRLGSVITIRRLTTDYTGTYKCMYENQPDLTSEVHIYVKDPHNILVTPRTLGD
VKDGSDVLLCQLTDPSATDLSLRLANGDPTPPDMNYTVNPKRGILIQYLLTSHSAEYVCS
AKINGVTIVSKVVPIIVIQRLRSPPSVLIEVDGYVRIVGEQLLIHCITSNPNHFYNVTWK
HSSLKALDFSHKMIQEDQSKQVHITSSVTIPAVAMSHTGNFTCTAMNEAGANSSTTYLQV
VDKPYIRLIPQLSPDLYLNGSLVEVNEGENLEINIRIEAYPQIKEQWWDMPMSHSHNIST
HDDTWAVQYNNRYESILLLQRVRSEERGQYTLHTRSTCLNGSITFNVQVYQKPSAMVRLK
NVTTLTCTASGYPAPIILWYQCPGIQNTCDGDNDTMEVQPLLTSTMEVQTEALGPEEVQS
ELTLSPLSMEVTVECVTVNLVGEERDIFVVRVPAETSLKYVTSKLFTPTLNGATSTAAFL
FLLLVIVLYKYKQKPKYEVRWKIIKANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILG
AGAFGKVVEATAYGLGTDDNMTTRVAVKMLKPSAHSEEREALMSELKILIHLGYHDNIVN
LLGACTQGGPMLMITEYCSHGDLLNFLHGKAKLFLDSILSGPGIPEDPRVPENSDHYKNT
CAQESRIRSDSGISCSSSNNYEDMHPAQRPKHCPMGSLCEDPETGTWSLDIEDLLRFSSQ
VAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIENDSNYVVKGNARLPVKW
MAPESIFECVYTVQSDVWSYGILLWEIFSLGKSPYPNVVVDTRFYNMIKDGCYMSQPDFA
PPEIYTIMKMCWNLEPTVRPTFSTIDQLIQMLLPDQPDQTYRNVQDKTPQQEAGEQGDPA
EMNEDCDQTLNQEGEEETLMKNNNFQFC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctagcccttttcataggcatcatggtctgctgcacagcccaagagcggagc
cctccggtgatcaagctgaattcggtggtgctgagggaggctgagtggactatgcctgtt
ggaacctcatctttcaccttgacctgtgaggggaacagcacagtcacctggtctaccaca
gcattcaaactcaagaggagtactagattggggagtgtgattaccatcaggcgccttaca
acagactacactggcacatacaagtgcatgtatgagaaccaaccagacctcacctcagag
gtccacatctatgtgaaagatccccataacatcttggtgacccctcgcaccctgggagat
gtgaaggatggcagtgatgttctcctctgtcagctgacagaccccagtgccaccgaccta
tccctccgtttggccaacggagaccctacaccccccgacatgaactacactgtcaacccc
aagagaggaatcctcatccaataccttctgaccagccacagtgcagaatacgtctgcagt
gcaaagatcaatggggtcacgatagtctccaaagtcgtccccatcatcgtcattcaaagg
ttgcgttcgccaccatctgtgttaattgaggtagatgggtatgttcgtattgttggagag
cagctcctgatccactgcatcaccagcaaccctaatcacttctacaacgtgacgtggaaa
cactcctccctcaaagcattggacttttcacataaaatgatccaagaggaccagagtaag
caagtacacatcaccagtagtgtgactatcccagctgtggccatgtctcacacaggaaac
ttcacttgtacagccatgaatgaggctggggccaacagctccaccacctacctgcaggtt
gtagataagccttacattaggctcataccccaactgtcaccggatctctacctaaatggc
tccttagttgaagtgaacgaaggagagaaccttgagataaacattcggatcgaggcgtat
ccccaaatcaaggagcagtggtgggacatgcccatgtctcacagtcacaacatctccact
catgatgacacatgggccgtccaatacaataacaggtacgagagcatcctgctgctacag
agagtgaggtctgaggagagaggccagtacaccctccacactaggagcacatgcctcaat
ggctccatcaccttcaatgtccaagtctaccagaaacccagtgccatggtcagactgaag
aatgttaccaccctgacctgcaccgcctctggatacccagctcccataatcctctggtac
cagtgcccaggaatacaaaacacgtgtgatggtgacaatgacaccatggaggtgcagcct
ctcctcaccagcaccatggaggtgcagacagaagcattaggtccagaggaggtgcagagt
gagctgaccctcagtcccttaagtatggaggtcacagtggagtgtgtgaccgttaacctg
gttggtgaagagcgggacatcttcgtagtgcgtgttcctgctgaaacttcattaaaatat
gtaacgtccaagttgttcacacccactctcaatggagccaccagcacagcagcttttctg
ttccttctgcttgtcatcgtgctgtacaaatacaagcagaaaccaaaatatgaagtccgg
tggaagatcatcaaggccaatgatgggaataactacacctttattgaccctacacaactt
ccttataacaagaagtgggagttccctcgtgataagctgaggcttggccagattctggga
gcaggggcttttgggaaagtagtggaggccactgcctatggtctggggaccgatgacaac
atgaccacgcgtgtggcagttaagatgctcaagccaagcgcccactcagaagagagagaa
gctttgatgtcagaactgaagatcctcattcacctgggatatcatgacaacattgttaac
ctattaggggcgtgtactcaaggaggcccaatgctgatgatcacggagtactgtagccat
ggcgacctgctgaacttcttgcatggcaaggccaagctgttccttgactctatcctgagc
ggaccagggattccagaggacccacgggttccagagaacagtgatcactacaagaacaca
tgtgcccaggagtctcgtataaggagtgacagtgggatctcctgctccagctcaaacaac
tacgaggacatgcatccagcgcagaggcccaaacactgccctatgggttccctatgtgag
gatccagagacaggcacctggtcgctggacatagaagacttgttgaggttctcctctcag
gtggctcagggaatggacttccttgcatccaaaaattgcattcacagggacgtggcggct
aggaacgttctcttgaccgatggccgtgtggctaagatctgcgactttggcctcgcccga
gacattgagaatgactccaactatgtggtgaaaggaaatgcccgtctgccagtgaagtgg
atggcccctgagagcatctttgaatgtgtgtacacagtgcagagtgacgtctggtcctat
gggatactgctgtgggagatcttctctctgggtaagagcccataccctaatgttgtggtg
gacacccggttctacaatatgatcaaagatggatgctacatgtctcagccggactttgcc
cctccagaaatatacaccatcatgaagatgtgctggaacctggaaccaacagtacgtcca
accttcagtaccattgaccaacttatccagatgttactgcctgaccagccagaccagacc
tacaggaatgtgcaggataagactccacagcaggaggcaggagagcagggggacccagct
gagatgaatgaggattgtgatcagacactgaaccaggagggagaggaggagaccctgatg
aaaaataacaacttccagttttgctga
DBGET
integrated database retrieval system
