Coregonus clupeaformis (lake whitefish): 121579672
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Entry
121579672 CDS
T08357
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121579672 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579672 (dmxl2)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121579672 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
121579672 (dmxl2)
RAVE complex
121579672 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
121579672
NCBI-ProteinID:
XP_045074284
LinkDB
All DBs
Position
Unknown
AA seq
3120 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPFATNPNKRHKQLNYQWQKTGQFFLNAITYNLAWDP
QGNRILAATERLQLWAPPSADTLIEEEDGPMTDDKPHPVLNDWKCVWQCKTAMSVHITKW
SPDGEYFATAGKDDCLLKVWYPTTGWRSAVVVSDLPDKKGPQVHFSFIYLAHPRSVTGLS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETVLPEDSILGGQITENTHSYSSSLPGLGG
KDKIQHALESMSHLKHLRRGRRRSSALVAHTELLPSQMGTHETHTHRHISHHANALCHFH
ISASINPATDIPAVLAESAVFTPEDGGGGGGFVVHWLNNKDLSFTSSMDLFMLQLRKLSE
QQLDQATDDPLDQDGSPIKFDFDLDEMSEKGSSEHGEEGEGGEGSTKASSPGSSSSVPLP
SMLLDRKMETLTLEWNKSPDMLFTIHPTDGSFLVWHVKYLDEYIQGIFRQVQVSFSSRIP
VAFPTGDANSLSKNILMYACSFSDMDSSNAGGSRGGGXRRLPHSASAGLGSSALSLSLAQ
APGIGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQACHTVL
PLLLTSSHHNALLTPPSAPSSIDLHQPHTHTPPPRGLRRKQLRNAATRTFHDPNAIYSEL
ILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVAS
DGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGS
TTQLLHVFQEDFILGYKPQEDPELYTTAYPSTEEYHPTPFSEKFFLVVIEKDLNRNSVLQ
MWHLHLQSVQACVDDPVPERSYQSQLTIPFQQSTADTSTDTSPLPRSASTVNLQSASKLI
LSSKLVCSHRLDLPIGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCSV
EDEEGGESALGCEERESRVYHWEPWALLNEEEDNNSAVCVPGRPVAVSCSYTGRLAVSFK
QPRPGHIPGKSHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDDFTRSSSTLDPRVSVD
SNLFVYNRSDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNE
QTASKDGVAIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSLPVSLSWVRDGILVVG
MDCEMHVYAQWRQDRKPGEAEGDSLSSADNIAGGVGGGGGQTATATTTGESSSAFKGRAR
SKSMFEGNVAIDEALQAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAI
LSHLVKCIAGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIVAGRDGGRDYTEINSI
PPLPLYALLSADLDTSYKGGEEGAKGGKVAEVEGTRKTGEDQYTDLFQLQAVTTDDFASF
ATEKVEKKSRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRLEQMFLVALADTVATT
SAEVSSSTDKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWA
FHSEAEEEMLNMIPAMQRGDPQWSELRAVGVGWWTRNINTLRRMVEKVGKAAFQRNNDPL
DAALFYLAMKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAALKNAFSLLGKQRFEQA
AAFFLLAGSLKDAIEVCLEKMEDIQLAMVVARLYEADYESSSTCQAILYEKVLGCQRDGS
GYHCTKLHPDPFLRSIAFWIMKDYTKALDTLLEXHPKEDDENPDVMVKSCNPVVFSFYNY
LRTHPLIIRRHYASPEGAVTSSLGLTSEKSSVDEINLIERKLFFTTANAHFKVGCPVLAL
EVLSKIPKVTKKSVSSSPLSKGSSMANVSSSLPLENGNQGDLDWASPAPVKATPAWGTEE
SSATLDWSQPLVKVEDDGLQLDWGDDKKDEDDDDDDGGGLTMKKTEVETKDDKGSGGVRP
PGLQRADSQGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYSWLEKEI
GAMHRICNYKVLGKEESQEVERWEDGGGVEDVFEESLGGGGGTETGAYERHQMERRRLAA
KQLHAERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQESQQETTVKQLQ
SPLPLPTTLPLLSASIATTKTVISNPVLHLSNHIHDILHTITHMELPPHPELMDDRVNLL
HTLAASLSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERRRLRTESIEEHATPTSA
PAQWPGVSSLIALVQSAQSEDQPKLNVLLCEAVVAVYLSLLIHGLGTHAGNELFRLAAHP
LSNKMWAAVFGGGAKIIIKPKRNAEVTPAAAAAGKARTDSSSSVTSEPDSGTKAKSAVPA
PPPAEDVDRLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYREKFIPPELSMWDYFVAK
PFLPLSDSGALYDSDESGAEDDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALH
NVKTFLPLTGLDFIDLPVTSPLGNAVLKTLENWETMLQERMNKFDGPPPNYINTYPTDLS
TGGGPAILRQKAMLEPDNTPFKNKNHMSFPARRLWHYLVKQEVLQETLIRYIFTKKRKQS
EYVEGHMDPLIPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDIIMAFAINRANTNEIVL
ASTHDVQEVDVSTLLAAQPYSWIGEDFDKESRSSDDVEYRSSHTNIAQASSTPSHFLPKD
MAASASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMTGAQDGSVRMFEWNRPQ
QLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYVSWQCHSKTCG
DFAFITSSSLIATAGQSNDSRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAPKQQLLI
SGGRKGFVCVFDIRQRQLLHTFQAHDSAVKALALDASEDFFVTGSAEGNMKVWKLAGQGL
MHSFSTEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPASIFDIL
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctaacgggagctgtgaaccccggtgactgctgctattctgtg
gggagcgtcaacgacattcctttcacggcctatggttcaggctgtgatatagtcatcttg
gccagtgattttgagtgtgttcagatcatccctggggctcaaaatggcaacatccaggtg
ggctgtgtcgagtgctcccaccaactgggcaggatcgcagcatcctatgggaacactgtg
tgtatctttgaaccattcgctaccaacccaaacaaacgccacaagcagcttaactaccag
tggcaaaagacaggacagttcttccttaatgctatcacctataacctggcctgggaccca
caagggaaccgtattctggcggctacagagcgcctgcagctgtgggcccctccgtcagca
gacacactgatagaggaggaggatggaccgatgacagatgacaaacctcaccctgtcctc
aacgactggaagtgtgtctggcagtgcaagactgcaatgtctgttcacatcaccaagtgg
tctcctgatggggaatactttgcaacagccggcaaggatgactgtctgttgaaggtgtgg
taccccaccactgggtggcgctctgctgtagtggtctcagacctcccagataagaaaggc
cctcaggtccacttctccttcatatacctggcacacccccgctctgtcaccggcctgtcc
tggaggaagaccagcaaatacatgcccaagggtagtgtgtgtaacgtgttgttgacgtcg
tgtgaggacggtgtgtgtaggttgtggtctgagacggtgctgccagaggacagtatcctg
ggtggtcagatcactgagaacacacactcctacagctccagtctgccaggcctggggggc
aaggacaagatacaacacgccctggagtcgatgagccacctgaagcacctgcgtcgtggt
cgtcggaggtcgtctgccctggtagctcacactgagctgctgccgtctcagatggggacc
cacgagacacacacccaccgccacatctctcaccacgctaacgctctctgtcacttccac
atctctgccagcatcaaccctgccacagacatcccagcggtgctagcggagtctgcagtg
tttactccggaggacggtggtggaggaggagggtttgtggtccactggctcaacaacaag
gacctgtccttcacctcctccatggacctgttcatgctgcagctccgcaagctctcagaa
cagcagctggaccaagccaccgacgaccccctcgaccaggatggctcccccattaagttt
gactttgacctagatgagatgtcagagaagggttcatcagagcatggtgaggagggtgag
ggtggtgaaggcagcaccaaggcgtcgtcgccaggctccagtagctcagtgcccctgccc
tccatgttgctggataggaagatggagactttaactctggagtggaataagagtcctgac
atgctgtttaccatccaccccaccgacggatccttcctggtctggcacgtcaaatacctg
gacgagtacatccagggtatcttcagacaggtgcaggtgtcgttctcgtcccgtatccca
gtggcgttccctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgc
tccttctccgacatggatagctccaacgccggggggagcaggggaggagggncccgccgt
ttgccccattctgcctctgctgggctgggctcctcagccctcagcctctccctggcccaa
gccccaggcatcggccccgctgtcatgatggtgtccaaacatgtggacgggtctctcaat
cagtgggcggtgacgttcgctgagcgctctgcgttctccaacgttctgaccgtgtctcat
aagttccgttactgcggtcaccggttccacctcaacgaccaggcgtgtcacacggtcctc
cctctactgctgacctcctcccaccacaacgctctcctcacccccccctccgcccccagc
agcatcgacctccaccagccacacacacacacacctccccccagaggactgcgcaggaag
cagctgcgtaacgcggccaccaggacgttccatgaccctaacgccatctacagtgagctg
attctgtggagggtggaccacatcggacccctgtcctgcactggaggggtgtcagagctg
gcccgaatcaactccctacacacatcagccttctccaatgtggcatggctgcctaccctg
gtacccagctctgtgctaggtacgtactgtaacagttccagtgcatgcttcgtggcgtca
gacggtaagaacctgcgtctctaccaggctgtggtggacgccaggaaactgctggacgaa
ctgtcagaccctgagacctcaaaactagtaggagaggtgtttaacatagtgagccagcag
tcgacagccagaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatct
accacccagctcctccatgtcttccaggaagactttattttggggtataaacctcaggag
gacccagagctctacactacagcctacccttctaccgaggagtaccaccctactccgttc
tctgagaagttcttcctggttgtcatagagaaggacttgaataggaactctgtgctgcag
atgtggcacctgcacctacagtccgtgcaggcctgtgtggatgatccggtcccagagcgg
tcgtaccagtcccagctgacgatcccgttccaacagagtacagctgacacgtccacggac
acctcccccctcccccgctcagcctccacagtcaacctgcagtcggccagcaaactgatc
ctcagctccaagctggtctgtagccaccggctggacctgcctattggggtggaggtgacc
agggctacaccctccgcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggcc
ccctacctgatcgtcaccacctgctctgactcccgcgtccgcttctggcgctgctctgtg
gaggatgaggaggggggagagtcagccctgggctgtgaggagagggagagcagggtctat
cactgggagccttgggccctactcaacgaggaggaggataacaacagcgctgtgtgtgtc
ccgggacgtcctgtagccgtgtcatgttcctacactggacgactggctgtctccttcaaa
cagccccggcccggacatataccgggaaagagccatggtccagcaggggacttctccatg
cacgtgtccatctttgagtgtgagtctacgggggggtcagagtgggtgttggagcagacc
ctccacctggatgactttactaggtcctcctctaccctggaccccagagtcagtgtagac
tccaacctctttgtgtacaacaggtctgacctgtacatgagtcgcgatcaccactctccc
aacatcaaacactacgtccacctggactggctgtccaaagaggacgggtctcatattctc
acggtgggggtggggtccaacatcctcatgtacggtcgtatctcgggcgtggtcaacgaa
cagaccgcaagcaaggacggggtggcgatcatcaccctacctctagggggcagcatcaaa
cagggtatccgttcccgctggatcctgctgcgcaccgtggacctgctctcctcggtggac
ggcaccccctccctgcccgtgtccctgtcctgggtgagggacggcatcctggtggtgggt
atggactgtgagatgcacgtgtacgcccaatggcgccaggaccgcaagcccggcgaggcc
gagggggacagcctctcctctgcagataacatcgccgggggggttggagggggcggaggg
cagacggccaccgccacaaccacgggggaatcctcgtcggcgttcaaggggcgtgcccgg
tccaaaagtatgtttgagggcaacgtggcaatcgacgaggctctccaggcgcctgcgggg
ctgcaggaggggggtctgttcgaggcggcccactccctgtcccccaccctgcctcagtac
catccaacacagctgctggagctcatggacctggggaaggtccgccgtgccaaggccatc
ctgtcccacctggtgaagtgtatcgccggggaggttgccgtggtgagggacgtggaggca
ggtgagggtggaaccagacgtcacctgtcccggacaatcagtgtgagcggcagcacggct
aaagacaccatcgtggccggccgcgacgggggacgtgattacacagaaatcaactccatt
ccccctctacccctctacgctctgctctctgctgacctggacacctcctataagggagga
gaggagggggcgaagggggggaaggtggccgaggtagaggggacgaggaagacaggagaa
gatcagtacactgacctgttccagttgcaggcggtgacgacagatgactttgcgagcttc
gctacagagaaagtagagaagaagtctagattcatcaacctgtctcagtatggacccacc
tacttcggaccagaacacgcacaggtgttatctagtcagctgatgcattccagtcttcca
ggtctgactcggttagaacagatgttcctggtggctctagctgatactgtagcaaccacc
agtgcagaggtcagcagctccactgacaaacagtacacaggtggtgaggccctggatgag
tgtgggttgaggtacctgttagccatgcgtctacacacctgtctcctcacctctctaccc
ccgctgtaccgcatgcagttgctgcaccaaggtctgtctacgtgtcactttgcgtgggcg
ttccactcggaggctgaggaggagatgttgaatatgatccccgccatgcagagaggagac
cctcagtggtctgagctacgggctgtaggggtgggttggtggacacgcaacatcaacaca
ctacgcaggatggttgagaaggtgggtaaagcagcgttccagaggaacaatgatccttta
gatgcagctctattctacctggccatgaagaagaaggctgttctctggggtctgttcagg
tctcagcgtgatgagaagatgacggtgttctttaagaataacttcagtgaggaccgctgg
cgtaaagcagctctgaagaacgctttctctctgctggggaaacagcgctttgaacaggct
gctgccttcttcctgctggctggctccctgaaagatgccatcgaggtgtgcttggagaag
atggaagatatccagttggccatggtagtagccaggctgtacgaggctgactatgagagc
agttccacctgccaagccatcctgtatgagaaggttttgggctgccagagggacgggtcg
gggtaccactgcaccaaactgcacccggacccgttcctacgcagcatagccttctggatc
atgaaggactacaccaaggccttggacacgctgctagagntgcatcccaaagaggacgat
gagaaccctgatgtgatggtgaagtcgtgtaacccggtggtgtttagtttctataactac
ttgaggacacaccccctgatcatccgccgccactacgcgtcccctgagggcgctgtgaca
tcatcactaggcctcacctcggagaagagcagcgtcgacgagatcaacctcatcgaacgc
aaactcttcttcaccaccgccaacgcacacttcaaggtgggctgtccagtgcttgccctg
gaggtgctctccaagatccccaaggtgaccaagaagtcagtctcctcgtcccccctgagt
aaaggctcttccatggccaacgtcagctccagcctgcccctggagaatgggaaccagggg
gacctggactgggcctctcctgccccagttaaggccactcctgcctggggtacagaggag
agctcagccacactggactggagccagcctctggtcaaagtggaggacgatggactgcag
ctggactggggagatgataagaaggatgaagatgatgatgatgatgatggtggtggtctg
acaatgaagaagactgaggtggagaccaaagatgacaagggatctgggggggtgagacca
cctgggctgcagagagcggactctcagggtgagtctgaggtggatgtgatcgcagagcag
ctgaagttccgcgcttgtctgaagattctgatgaccgagctacgtacgctagctacgggc
tatgaggtggacggagggaagctgcgctttcagctctacagctggttagagaaggagata
ggagccatgcaccgcatctgcaactacaaggtgttggggaaggaggagagccaggaggtg
gagagatgggaggatggaggaggagtagaggacgtgtttgaggagtccctggggggtggc
gggggtacagagacgggggcgtatgagcgccaccagatggagcgcaggcgtcttgcggcc
aagcagcttcatgctgagaggaggaaggcgtggctgaggaagaaccaggctctgctccgg
gtcttcctgtcctactgcagcctacacggggccaagggagggggggtcacctctgtacgc
atggagctcatcttcctgctccaggagagccaacaggagactacagtaaaacagctccag
tcccccctgcccctccccaccaccctccccctcctctcagccagtatcgccaccaccaag
acggtgatctccaaccctgtcctccacctcagcaaccacatccatgacatcctccacacc
atcacacatatggagctgccgccacaccctgaactcatggacgacagggttaaccttcta
cacaccctggctgcctctctgtctgcctgcatctatcaagccctgtgtgacagccatagc
tacagcagccaggcagaggccaatcagtttacagggatggtgtaccaaggtctactgctg
agtgagaggagacggttacgcaccgagagcatagaggagcatgctacacccacctctgcc
ccagcgcagtggccaggtgtgtcctctctgattgctctggtccagtcagcccagagtgag
gaccagcccaagctcaacgtgttgctgtgtgaggcggtggtggcggtttacctgtccctg
ctcatccacgggctgggcacgcacgctggcaacgagctgttccgcctcgccgctcacccc
ctcagcaacaagatgtgggcggccgtgtttgggggcggggctaaaatcataatcaaaccc
aaacggaacgccgaggtcactccagcagcagcagcagcaggtaaagctagaacggactcg
tcatcgtcagtgacctctgaacctgactcagggactaaggctaaatcagccgtgccggcc
cctcccccggcagaggatgtggacagactcagacggaggtttaatatgaggatgctggtt
cctggtcgtccagtaaaggaggtccctgccaccccccctcccgtccctgcagagagacct
gcatacagggagaagttcattcctccagagctcagcatgtgggactactttgtggccaaa
cccttcctgcccctatcggacagtggagctctgtatgactcggatgagagcggagcggag
gatgacgacgacgatgatgatgatgccttcctctctgacacacagatgactgaacactct
gaccccaactcatacagttggtctctgatccgtctggtcatggtgaaactggctctacat
aacgtcaagaccttcctccctctcactggactggacttcatagacctgccggtgacgtct
cctctgggtaatgctgtgctgaagacactagagaactgggagaccatgctccaggagagg
atgaataagtttgatggtcctcctcccaactacattaacacctaccccactgacctcagc
acaggagggggacccgccatactgagacagaaggccatgctggagcctgacaacacacct
ttcaagaataagaaccacatgtcgttccctgcgaggcgtctctggcactacctggtgaaa
caggaagttcttcaggagactctgattcgctacatcttcactaagaagaggaagcagagc
gagtatgttgaaggccatatggatcccctcatcccaaactgtgtatctggagctctcagg
tccaacaaggtggagggagacttaggctacccaggaaggaatgctaagatcatccacaag
gagtctgacatcatcatggccttcgccatcaacagggctaacaccaatgagatagtgctg
gcgtccactcatgacgtgcaggaggtagatgtgtccactctgttagctgctcagccctac
agctggataggagaggactttgacaaggagtcacgcagttctgatgacgtggaataccgt
tcttcccacacgaacatcgcccaggcctcctctaccccgtcccacttcctccccaaagac
atggcagcctccgcatccatgccctggctggggagtgggcagaccagcatgggagctagt
gtgattatgaagaggaacctgaacaatgtcaagagaatgacctcccatcccatattccag
tactatatgactggggctcaggacggcagtgtccgtatgtttgagtggaacaggccgcag
caactgatctgcttcagacaggcaggcaatgccagagtcacacgcctctacttcaactca
cagggaaacaagtgtggtgtagctgatggagagggcttcctcagtctgtggcaggtcaac
cagacctcctccaaccccaagccctacgtgagttggcagtgccactctaagacctgtggt
gattttgccttcatcacttcctccagtctcatcgctacggcaggacagtccaatgacagc
agaaatgtatgcctgtgggacactcttatttcacctagtaacaccatggtgcatgccttc
ccgtgccatgagaacggtgcgacggtgttgcagtacgctcccaagcagcagctgttgatc
tcgggaggcaggaagggctttgtgtgtgtgtttgacatccgacagagacagctcctacac
accttccaggcccacgactcagccgtcaaagccctggcactcgacgcctccgaagacttc
ttcgtaaccggctcagctgaggggaacatgaaggtgtggaagctggcaggccaaggcctc
atgcactcgtttagcacagagcatgccaagcagtccatcttccggaacatcggagcgggc
gtcatgcaggtggagacccgccccggcaaccgcatattcacctgcggcgccgacggaacg
ctcaagatgagggttctacccgaccgctacaacatccccgctagcatcttcgacattctg
tag
DBGET
integrated database retrieval system
