Coregonus clupeaformis (lake whitefish): 121579686
Help
Entry
121579686 CDS
T08357
Name
(RefSeq) eukaryotic initiation factor 4A-I
KO
K03257
translation initiation factor 4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121579686
03012 Translation factors [BR:
cclu03012
]
121579686
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121579686
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121579686
mRNA cycle factors
Stress granule specific factors
121579686
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-4
121579686
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121579686
Exosomal proteins of bladder cancer cells
121579686
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
121579686
NCBI-ProteinID:
XP_041750421
LinkDB
All DBs
Position
13:49140610..49204089
Genome browser
AA seq
409 aa
AA seq
DB search
MSADYEERDLSNRDNGPEGMEPDGIIESNWNEIVDSFDEMALRETLLRGIYAYGFEKPSA
IQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQ
KVILALGDYMGASCHACIGGTNVRNEVTKLQAEAPNIVVGTPGRVFDMLNRKFLSAKYIK
MFVLDEADEMLSRGFKDQIYEIFQKLCTSTQVVLLSATMPQDVLEVTKKFMREPIRILVK
KEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagattatgaagaaagagacctctccaacagagacaatggcccagagggcatg
gagccagatggcatcattgagagtaactggaatgagatcgtggacagcttcgatgagatg
gccctgcgtgagactcttctgagaggaatctatgcctatggttttgagaaaccgtctgcc
attcagcagagggccatcctcccttgtatcaagggttatgacgtcattgcacaggcccag
tccggcacagggaagactgccacgttcgccatctccatcctccagcagattgatatcgag
ctgaagggcacccaggccttggttctcgctcccacccgagagctggctcagcagatccag
aaggtgatcctggccctcggtgactacatgggagcctcctgccatgcctgtattggcggc
acaaacgtccgcaacgaggtgactaagctccaggctgaggctcccaacatagtggttgga
acgccaggccgcgtgtttgacatgttgaaccgcaagttcctctctgctaagtacatcaag
atgtttgtcctggacgaagctgatgagatgttgagccggggtttcaaggaccagatctat
gagattttccagaagctttgcaccagcacacaggtggtgctactgtctgccaccatgcct
caggatgttctggaagtcaccaagaagttcatgcgtgagccaatccgtatccttgtgaag
aaggaggagctcaccctggagggtattcgccagttctacattaatgtggagaaagaggag
tggaagctggacaccctgtgtgatctgtacgagaccctgaccatcacccaggctgtgatc
ttcatcaacacccgcaggaaggtggactggctgactgagaagatgcacgccagggacttc
actgtctctgccctgcacggtgacatggaccagaaggagagggacctgatcatgagggag
ttccgctctggctccagccgtgtcctcatcaccacagatctgctggctcgaggaattgat
gttcagcaggtgtctctggttattaactatgacctgccgaccaaccgtgagaactacatt
cacaggatcgggagaggaggccgtttcggcaggaagggtgttgccatcaacatggtgact
gaggaggacaagcgcacactccgggacattgagacattctacaacaccacagtagaagag
atgcccatgaatgtggctgacctgatctag
DBGET
integrated database retrieval system
