Coregonus clupeaformis (lake whitefish): 121579702
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Entry
121579702 CDS
T08357
Symbol
adamts8a
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 8
KO
K08623
a disintegrin and metalloproteinase with thrombospondin motifs 8 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121579702 (adamts8a)
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121579702 (adamts8a)
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
TSP1_ADAMTS
Reprolysin
ADAMTS_CR_2
Reprolysin_5
TSP_1
Reprolysin_3
Pep_M12B_propep
TSP1_CCN
Adt-1
ADAMTS_CR_3
TSP1_spondin
TSP1_CFP_C
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
121579702
NCBI-ProteinID:
XP_041750459
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All DBs
Position
13:51167080..51191939
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AA seq
953 aa
AA seq
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MGSTLHITFLTLSLTNVVLSELFHSEETIPVRNSVKTIGRLWKRSEEEQSFRLTAFGQDF
TLNLTPDDSFVAPTLTIQHIQSKHLAALFNGTRSGHFTGGITKTEGNRDDLTGCFYSGNV
DTDQESAVVVSLCHGMQGSFIAHGYEYLIKPKVLGQGKIERSLLQVHVIKRRVLTDAQKI
SKTFQAFDQVKDKSRLATDDGTSSPVDDAERAKGRKRRFVSSPRYIETLVVADASMTHFY
GDEIKHYLLTLMAVAARVYRHPSLKNSVSLVVVKMLVVEDEDVGPQVSSNGGMTLRNFCN
WQQLFNPSSQRHLEHYDTAILFTRQDICGQRSCDTLGMADVGTMCDPKRSCSVIEDNGLQ
AAYTVTHELGHVLSMPHDDSNNCIRWFGHLDGPHMMASVFFSLNRTLPWSPCSARYVTEF
FDNGYGDCLLDPPEQTLPLPVDPPGVSYNLDRQCQQAFGEEFTLCPDTPEDQTCSQLWCR
EEGQPHCTTRNGSLPWADGTLCWVGAGAGAGANTTCQGGVCAAVTDQQKIKEPVDGGWSV
WGPWGLCSRSCGGGVEFSQRECTDPKPQNGGAYCVGQRAKYQSCHIQACQDEHGKSFRDE
QCEKYNSDRYLDIHGNIKQWIPKYNGVSPRDRCKLFCRARDSNEFKVFEAKVVDGTTCGP
DTTSICVQGQCVKAGCDQVIGSSVKLDKCGVCGGDGTTCRKITGSMNKAIFGYNNIVTIP
AGATNIDIKQKSHRGIKHDGNYLALKTEGSYILNGNFSVSIAEQDIPVLGAVLRYSGSST
TLERVLSYQKLRQAVTVQLLSTAGDASPPRVKYTFFLSRDVPFTKPGAEGKASLHAILPL
GGAEWALGEWSECSKSCGSGWSRRNVECRDGGATLSFSCDEDLRPVDIRPCGDLPCPVWQ
MGPWSACSRTCGVGVRHRSVLCIDYTGKMAELGKCNPAKRPEVVSSECSYQDC
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaactttgcatatcacttttttaaccctgtccttaaccaacgttgtgctgtcg
gaattgtttcactcggaggagaccatccccgtcagaaacagtgtgaagaccatcggtcgg
ctatggaaaaggagcgaggaggaacagagcttcagattgacagctttcggccaggacttc
acactgaatttgactccggatgactcgtttgttgctccaacgttaaccattcagcacata
caatcgaaacatctggctgcacttttcaacggcaccagatcaggacattttaccggtggt
atcaccaagacagaagggaatagggacgaccttaccggctgcttctactcagggaatgtg
gacaccgaccaggaatctgctgtcgtggtgagcctgtgccacgggatgcaagggtccttc
atagcgcacgggtatgagtatctaattaaacccaaagttcttggccaaggtaaaatagag
agatcactcttgcaggtgcacgttataaaaaggagagttttgaccgacgcacaaaagatt
tccaagactttccaagcttttgatcaggtgaaggataagagccgtctggccacagatgac
ggcacttcatctcctgttgatgatgctgagagagcgaagggacggaagcgacggtttgtc
tcctctccaagatatatcgagacgctggtcgtagcagacgcttcaatgacacatttctat
ggagacgaaataaagcattacctgctgactctcatggcagtggcggcgcgggtctaccgc
caccccagtctgaagaactcagtgagcctggtggttgtgaagatgctggtggtggaggac
gaagacgtagggccccaggtgtccagcaacggaggaatgaccctcaggaacttctgtaac
tggcagcagctcttcaacccctccagccagaggcaccttgaacactacgatacagccatc
ttattcaccagacaggacatctgtggtcagaggagttgtgacaccctggggatggctgac
gtgggcaccatgtgtgaccccaagagaagctgctctgtaatagaggataacggtctgcag
gcggcctacaccgtgacacacgagctaggtcatgtactcagcatgcctcatgacgactct
aataactgtatcagatggttcggacacctggacgggccccacatgatggcgtctgtgttc
tttagcctcaacaggaccttgccatggtcgccatgtagcgcccgttatgtcacagagttc
ttcgacaatggatatggtgactgtctgttggatcctccagagcagactctacctctccct
gttgatccccccggtgtctcctacaacctggaccgtcagtgccagcaggccttcggggag
gagttcaccctgtgcccggacaccccagaggaccagacttgcagccagctgtggtgccgg
gaggagggccagccacactgcaccacccggaacggcagcctgccctgggctgatggcaca
ctctgctgggttggggctggggctggtgctggggccaacaccacctgtcagggaggtgtc
tgtgctgcagtgactgatcagcagaaaataaaggagcctgtggacggaggctggagtgtg
tggggcccctgggggttgtgctccaggtcatgtggcggaggggtggagttttcccagaga
gaatgcactgatcccaagccacagaatggaggagcatactgtgtgggacagagagccaag
taccagtcctgtcacatacaggcctgccaagatgagcatggtaagagcttcagagatgag
cagtgtgagaagtacaacagcgaccgatacctggacatccatgggaacatcaagcagtgg
atccccaagtacaacggtgtctcaccaagggacaggtgcaaactgttctgcagagcaaga
gacagcaatgaattcaaagtcttcgaggccaaggttgttgatggcaccacctgtggccca
gacaccacctccatctgtgtccagggacagtgcgtcaaagctggctgcgaccaggtgatc
ggctccagtgtgaagctggacaaatgtggcgtgtgtgggggtgatggaacaacctgcagg
aagatcactggatcgatgaataaagccatatttggctacaacaacattgtgaccattccg
gccggggccaccaacattgacatcaagcaaaagagccaccgcgggatcaaacacgacggc
aactacctggccttgaagacagaaggttcctacatcctgaacgggaatttctctgtgtcc
atagcagagcaggacatcccagtcctgggtgccgtactccggtacagtggttcctccacc
accctggagagggtcctgagttaccagaagctccggcaggcagtcactgtccaactcctg
tccacagccggagacgcctctccccctagggtcaagtacacctttttcctctccagggat
gtccccttcaccaagcctggagctgagggtaaagcttcgctacatgcgattttgccacta
gggggcgcagagtgggctctgggggagtggtccgagtgctccaagagctgcggctcaggt
tggtcgagaaggaacgtggagtgccgggacgggggggccaccttgtccttctcctgtgat
gaggacctgcggccggtagacatccggccatgtggggacctgccctgccctgtctggcag
atgggtccctggtcggcatgctcgaggacatgtggtgtgggggtgcgccatcgaagcgtg
ctgtgtattgactacaccgggaagatggcagagctagggaaatgtaaccccgccaagagg
ccagaggtggtttcttcagagtgcagctaccaggactgctga
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