Coregonus clupeaformis (lake whitefish): 121579725
Help
Entry
121579725 CDS
T08357
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121579725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121579725
03036 Chromosome and associated proteins [BR:
cclu03036
]
121579725
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121579725
Coactivators
SAGA/TFTC/STAGA complex
121579725
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121579725
STAGA complex
121579725
TFTC complex
121579725
SAGA complex
121579725
SLIK complex
121579725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
TFIID-31kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121579725
NCBI-ProteinID:
XP_041750498
LinkDB
All DBs
Position
13:complement(52295715..52322559)
Genome browser
AA seq
639 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGGSIQ
KGQGATSAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWMDDKT
QWTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKSVSDGPVVSNIDKIGADHVQSLLL
KHCASVIAKTRPLPDNVEQYRVDYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPR
PTLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGASST
QQVITLSSSSASSVTSTVASATSTLQPLVKLESGGAGSLGGSRPLQKYIVVSLPTSTSSS
LESKSGVLPPSSSTSPILLEAGMKMERSDSPGASTQSPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccactgagtcgatgaag
gccatggcagagtccattggagtggggcagctacaggaggagagctgtgccgccctgagc
gaggaggtcagctacagaataaaggagatcgctcaggacgcgttgaagtttatgcaccat
ggaaagagatgtaaactgacgaccagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatggcttccagtcgcaggagttcatcccgttccgcttcgccagcggagga
gggcgggagcttcacttctacgaggaaaaggaggtggaccttagtgacatcatcaacaca
cccctccctagagtcccacttgacgtttcgctgaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaaggctgaa
tctacagagcccctcaaagcggtcaagcctggtcaggaggaggaggggggctccatccag
aagggccagggtgctacatctgcagaggctaaaggtaagaaggagggtctgatgaggatg
aagccccgcagtactcacgagctctcagtggagcagcagctttactacaaggagatcaca
gaggcctgcgtcggatcctgtgaggccaagagagcagaggctttacagagtatcgctaca
gaccctgggctctaccagatgctccccagattcagcacttttatttctgaaggggtccgt
gtgaacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggcc
ctcatggacaaccccacactctacctggagaaatatctgcatgagttgatcccagcggtg
gtgacgtgtatagtgagtaagcagctgtgcttgcggcctgacgtggacaaccactgggct
ctgagggacttcgctgcccgtctcatggcccagagctgtaagaccttcagcactaccacc
aacaacatccagtcacgcatcaccaagaccttcaccaagagctggatggatgacaagact
cagtggacaacacgctacggctgcatcgctggactgtctgaactaggacctgacgtgatc
aagactttgatccttcccaggctcactgtagaaggagctcgtatcaaatcagtgtctgat
ggacccgttgtctctaacatcgataagataggagcagaccacgtccaaagccttttactg
aaacactgtgccagcgtcatcgctaaaactcgtcccctgcctgacaacgtggagcagtac
cgggtggactatggttatcttgggcccatgctgtgttctcatgtggtcaaggccagggcc
caggcagcactacaggcccagcaggtcaacagaaccacactcaccatcacacagcctcgg
cccaccctaacagtgtctcagagcgggataggagggtcaggggggtcccgtacccccagc
atcatcaaggtacccagctccctcaccctcatgtccacccgaccaggcaccccaacacag
ccatcgcccccggcaaccaagtacatcgtcatggcaaccagctcaggcgcatcttccacc
cagcaggtgatcacgctgagttcctcctctgcctcctcagtgaccagcacggtcgccagc
gctacctccaccctgcagcctctggtcaagctggagtccggaggggccggcagcctgggg
gggtcgcgacccctccagaagtacattgtggtgtccctccccacgtccacctcctcctct
ctggaaagtaagagtggcgtgctccctccctcctcctccacctcccccatcttgctggaa
gccgggatgaagatggaacgctcagactcccccggcgccagcacacagtccccgcactga
DBGET
integrated database retrieval system
