Coregonus clupeaformis (lake whitefish): 121579739
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Entry
121579739 CDS
T08357
Name
(RefSeq) CD166 antigen homolog isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121579739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121579739
04090 CD molecules [BR:
cclu04090
]
121579739
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
ALCAM
121579739
CD molecules [BR:
cclu04090
]
Proteins
121579739
BRITE hierarchy
Motif
Pfam:
Ig_3
Ig_2
I-set
C2-set_2
ig
V-set
Ig_4
Big_7
Motif
Other DBs
NCBI-GeneID:
121579739
NCBI-ProteinID:
XP_041750524
LinkDB
All DBs
Position
13:53186244..53262590
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AA seq
562 aa
AA seq
DB search
MDSTGHFLLSLVTAATVLQVCSTVTVIGLYGATIEVPCNNGAAKPEDLIFTKWKYEMDDH
TSGDLLVKQAHKEEAQIKAMDGYKDRVSIAANSSLMIQGGSLVDQRTFTCMVVYGSNLDE
HPVDVLVHKKPLPPQIKDKAKELENGKLTSLGVCMAADANPAAEIVWSKNGKLLVADGKT
IIITPSVKVDPSTGLSTTTSGLQYTAVKSDMEAKFTCTAKHSLETQMSAPETFTIHYPTE
KLSLQVLAKAPIREGDNVTLKCKADGNPPPTSFNFSIKGQKVTVKDSDTFTLTAVTRDNT
GDYKCSLVDDGKMEASEKILVSYLDLSLNPTGKVVKMVRETLVVKMEQNASGDAKVSWTK
DNRKLDKEPRFEHVSYADAGFYVCEVSVAGIKRNQSFQLVVEGTPVIKKMTKQHSEDGRH
KVLTCEAEGVPRPSVQWSVNGTNEESSYINGKATHKITVVPTGNLTITCIATNKLGDDFM
AINVSSLIKEERMPGKGAQDDSSDQAQLIVFIVVGLLVTAAVVGLAYWLYIKKSRQGTWK
TGEKEAGTSEESKKLEEYNAKV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggattcgactggccacttcttgctttctctcgtcactgctgcgacggttctacaagtt
tgtagcacagtaactgtgataggcttgtacggagcgacgatcgaagtgccatgcaataat
ggagctgccaagccagaggatcttatcttcactaaatggaaatatgagatggacgaccac
acttccggagacctcctggtcaagcaggcgcacaaggaggaggcccagatcaaggccatg
gatggctacaaggaccgagtgagcatcgcggccaactccagcctcatgatccaggggggt
tccctggtggaccagaggaccttcacctgcatggttgtgtacggctccaacctggacgag
caccccgtcgacgtcttggtccacaagaagccgttgccaccgcagataaaagacaaagcc
aaagagctggagaacggcaaactgacatcgctaggcgtgtgtatggccgcagatgcaaac
cccgccgccgaaatcgtgtggtccaaaaatggcaagctgctggtggctgatggaaagacc
atcatcattacgcccagtgtgaaggtggatccgtcgacgggcctgtccactaccacgtcc
ggtctgcagtacacagcggtgaaaagcgacatggaagccaaattcacctgcaccgccaaa
cacagcctggaaacacagatgtccgctcccgagaccttcaccattcactatccaacagag
aagttgagcctccaggtgctggcgaaggctcccatcagagagggcgacaacgtgacgttg
aagtgcaaggcggacggcaaccctcctccaaccagcttcaacttcagcatcaagggccag
aaagtgacggtgaaagactccgacaccttcactctgactgccgttacgcgtgacaacacc
ggagactacaagtgctcactggtcgacgacggcaaaatggaggcctcggaaaagattctt
gtgagctacttggatctcagtctcaacccaacaggaaaggtcgttaagatggtcagggaa
accttggtggtgaaaatggagcagaacgcctccggtgacgctaaagtgtcatggaccaag
gacaacagaaagctggacaaagagcctaggtttgaacatgtgtcgtacgctgatgcaggg
ttctacgtttgtgaggtgtccgttgcaggcatcaagcgcaaccagtccttccagctggta
gtagaaggcacaccagtcatcaagaagatgactaagcagcacagcgaggatggcagacac
aaggttctgacctgcgaggcagagggcgtgccccggcccagtgtccagtggagcgtcaac
ggcacaaatgaggagagttcctatatcaatggcaaggcaactcacaagatcacggtggtg
cccacgggaaacctgaccatcacctgcatcgcgaccaacaagctgggagatgacttcatg
gccatcaacgtctcctccttaattaaggaggaaagaatgccaggaaaaggggcacaggat
gatagttcggaccaggctcaactgattgtgttcattgttgttgggctcctcgtaaccgcc
gctgttgtggggctggcctattggctctacattaagaaatcaagacaagggacctggaaa
acaggagagaaggaagccggaacgtccgaagagagcaagaaactggaggagtacaacgct
aaggtgtag
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