Coregonus clupeaformis (lake whitefish): 121579742
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Entry
121579742 CDS
T08357
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121579742 (cfap54)
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121579742 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
121579742
NCBI-ProteinID:
XP_045080450
LinkDB
All DBs
Position
13:53514170..53661340
Genome browser
AA seq
3120 aa
AA seq
DB search
MEPLPASFYGKINKRNPVISAFDGDIKKFMSFIKRISTLPTYDHNSYARGAKTLFEIWNK
YKPRLPTNYYEEHMLQMADFLFGIKLYRLGQWQGYSRYLQQFSTVTIEDIRDVDHFRTSF
FPKGFDTDQAKLTFRALQGYCLCAFQLERERGSQPTQEGVQRLLSILGFVRIMMQAVLPH
EHLCWLLYNGSLYIYNICRYLMSMSRAAQAMEFLLWACICLETSIPLTTARFLAWRATLY
CAVCQCYYDSQAHVQAEVFARRALGKVSELGKLEEMSGLPSTTETQRAYKVATIKLSTMV
FKRSVYEPRRKPKGLFRSKQKSNLKEIQSMPWPRTPTERVLMELFEGNAAQFLAIVEALW
DTSRRPLQTGMPEEPEIQEVSLELMSAGISILSGIGGSTERARDDTLPTCLNAVTANVTL
MDMAAAGENKVSVDAAVKFVKLLFRYEQWDMYCILSDTLQHTVLPRMEGRSFRKSELELS
LLDSMERLMSTQKIRLNTKDDTVSEKDRQLGVVMSEEFVGLVQALYSCVCGSAQDVQPDR
DLVMDIVLYLWSKCKMVFQRAQVRHWDPIRFLGKMENLDKWVWTLSVLSEVAHVCELADS
DPMVLAEMTIRLAMVMESTADSTVHSASSEDNSVESTPIEKNTDTFSMFKKSTAEQLQSV
WDVVERGLEGVIRGWTRLLPCDGSAISDTVFMQKFAGLAMRSPAGGGDGERVKRPSLSLS
LSLIPMDLHLELLSVQHRVSLKLLNICPAELQQHAGDSRRTMRPPGGVETPETMANRARG
ESVLLERIRKNKISIALFLVQNALLSHKKDQNSSATKRLLEEAVVLIEKAEVEERKLFSS
SGSSERKEGGGEEKRNTRPPPSPILLSRTYHSMTFIPAPYALEEQVCWYHIYAREAEGIN
LKVRLGDNNLVGTGDEVPASGERLLRVECLEPNQKYVFAVAAYDAGGKLVGNAIGETTRP
LLASLPLPLLTTWAHLAQAAYQTGQHALAKRACSELWSHFTQPKGLQEPGATLDGLAQTG
LRLETLQRSSPLLLHLFLSSILMQTEIHIQEGALFCDTLSDRGPLIWGQEARLAECERML
VAIDLALWLNDSSTALQAVVGCYGLLAPLMFHQIPAEPVLQVLMKCLAVLTEISGVVKQK
RQATTSESLLHMIACITYYVAKALRTLEKHRVAATVIEQGKKLLHEVLETQGPSKPLPVE
PDWIEKQLKKAGSIQGEEEQNEQMKALEGSAMKNKRTGAFMQHDSSAWSRAVAHTHELTG
QEDPILLYPIVTNSPLKAAFKDLMKFKRKACFMEFAVLLLQRTMQEDHLELVLQWGHDIF
GWLSRRDEGLTGPKKGPGDRSTSGKELKKFSSSVMEYKNNKASTFWSDKKRKEFLQKKQL
TALKAQNTEREYKAVETMLNQLAPLVRRHQRRRCLRQVCSEEWLWRCHLNLSTARAHLGL
LRRSLENHHGLGALQHSYSQLPLSLFSLAHSGTLVRWRNMPQHIGVPDLIPPPPKATTQP
RLRTYRRAILHKAKESGQAATTTSGEDFNTTESSEQDSEQDSPRAQPAVDSDCSEPSVMT
TSPTRRTVTQLLESLNKAALHLRRAMVLAHRGGHWTTLQCVCRTLWDQGCTITLLVDRGA
SMEPPIPLTLDQLYTVLTPLFALATDLLMNMMERMQLWQVFEVKDEEMEASMHFSAPMDD
GTLVDLRWIRSLTLHTLELLYLEARWETLAHLALLFNSHTQECYTHMITPILVHAQRRLL
ERISYFGGPPVPQPHLIKTQNVTGEKITCKNYAGRQLLNCWTPPAVPAPRRGCNTPTNPN
AAELLELSEVRRAMCVVCVPLDVEDTLCCFREALEKGNHTLRIFQHSRTLLLLLLAHTQP
LFEVPFCKENSSQAQGHGRVDFNVTVCTAPSIGPPDLTTEDYSTLSSVYGCPLAPNQIHT
VINSYSNSIQYLQANNHDSLRVQALHDLGNLHYYNGNRRAAHFYWSQAVDCALQSSGVLD
SWDGVSWGTGSLQHQPTLRQAGVWGCLQGALLTAKIAQYALTSNISQRTKCCLLSAQLFK
CLLRASLPHPQSDLQYSSYTVGEELVPGLDLFSEPDRGHLGTTVSSLDFLCHWLYTSGHH
LTALPMLALYLHFVGTVCRDPHLTIKGRILKVKVLTELGQYCQAMKETSQMTQGEEIPLP
HGCYSGIEKHVTFRKFFTNKSLMDSANMQALEDLVNRRLGTEASVLYGSRLSRHVTLARV
QLILALSSTIHSLPEPQDISDGAVRCSVVRRTSSTPGIPNSPPGERDSDSDKSHGGSPTR
KTREPKGLHLDPQKDKLTLSKVKALLLREVCRLLSPQLQLCLSSQPHSDPEELELAIDTY
LLLSNLYLQQGKTAYSADMAVSAMSLLQNSPITLRGSPSPVHRPLSSSLRRQSRPKSEQG
GMREAEHHAPSPQQGDCPQAVEARERMERSLWLRCRLAVVRSLVAHIPGTAIYPGMDSSV
VATKLLKEGLQEAEVWGDPDTRALFLLQGARLDTHRGLPRENSTSLLQEAVSLLSGHSCL
PPGSSVTLAQATLLLSDLRGTGSQALHLLTQKLLQQQLCVLGESVSLGESGRVILPPAPG
LSNIYLPHLPLLAKATMRLGHCLAVQAMTSAPASSVSSPTSSSTPWVCAQEVLQSALLLS
QACATRDRQLEADILYCKGMVERCLMSLSDFQPQTVAVTLLESINISLSQSHNLQLIRKC
YLEMALVYLHQWEQSSPAPQDQQNPVPPSPPKKAILKPPGWKRVRTTLNRGLTPGEAYLL
LYWVSVRAATKASEAMSTCSQLCGSTGAKGGHLPLISLKVLPDFASNDLLNPCGGIDVMM
RTVSSPSPELDPGLSSRKRSQLTWVHLSRYYKHLFNLQHIAMRPVVPQCVEGLVSQSEDS
SLALRLVQLQTFFCSHMVAYRESCCAPEPPTEIIMQPQIIQMCPTVRGTMGAQMYPWSFA
DRKQLCIQWHRPALSPTQEDTDTVMLLFGLNKVPLSAMRATACAVIELQCGQKLVSMAKL
CTVHAQLASACVGGNISSPPAASSAPSSPSPKMERQRRTKIPDKAVTSSPPIQMLQEKTR
CCCAAIKDLLQPGSEAAVLTEVPFEASLHSLCDLERCFNPASGATVEENTLITWLMSLLV
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atggagccactgccagcttcattttacgggaaaattaataaaagaaacccagtaatatca
gcgtttgatggagacataaagaagtttatgtcatttattaaacgaattagtactttgcca
acctacgaccacaactcctacgcaagaggtgccaaaactctgtttgagatatggaacaag
tacaaacctcgactaccaaccaactactatgaagaacacatgctgcaaatggcagatttt
ctttttggcatcaagttatacaggctgggtcaatggcagggctacagtcgctacctgcag
cagttcagcactgtgaccatagaggacattagggatgttgaccacttcaggacctccttc
ttccccaaggggttcgacacagaccaagccaagctgacgttccgggctctgcaaggctac
tgcctgtgtgccttccagctggagagggaaagagggagccagcccacccaggagggggtc
cagagactcctcagcatcctggggtttgtcaggatcatgatgcaggccgtgcttccccac
gaacatctctgctggcttctttacaatggttcactctatatctacaacatctgtagatac
ctgatgtccatgagccgcgctgcacaggctatggagttcctgctgtgggcctgtatctgt
ctggagacctccatcccactgacgactgccaggttcctggcctggagggccactctgtac
tgtgctgtgtgccagtgctactacgacagccaagcccatgttcaggcagaggtgtttgca
cggcgagccctgggtaaagtcagtgagctgggcaagctggaagagatgagtggtctaccc
tctaccactgagactcagagagcatacaaagtggccaccattaagctatctacaatggtg
tttaaacggtcggtgtatgaacccaggaggaaacctaaaggcctcttcagatccaagcag
aagagtaacctcaaggagattcagagcatgccgtggcctcgaacccctacagagcgagtg
ttgatggagctgtttgaggggaacgctgcccagttcctggcgatagtggaagctctgtgg
gacacctcccgccgcccactacagacaggcatgcctgaggagccagagatacaggaggtc
tccctggaactcatgtctgcaggcatcagtatactgtctggaattggaggctccactgag
cgagccagggatgacactctccccacctgtttaaatgcagtgacagccaacgttactctg
atggacatggctgctgctggggagaacaaggtgtctgtggatgcagcggtgaagtttgtc
aagctgctgtttcggtatgagcagtgggacatgtactgtatcctctctgacacactgcaa
cacaccgtgctgcctagaatggaggggaggtctttcaggaagtcagagctggagctgagc
ctgctggactccatggagcgcctcatgtctacacagaagatcagactcaacaccaaggac
gacactgtgtctgagaaggacaggcagctgggagtggttatgagtgaggagtttgttggt
ctggtgcaggccttatacagctgtgtctgtggttcagctcaggacgtgcaacccgacaga
gacctggtgatggacatagtgctgtacctctggtctaaatgtaagatggtgttccagaga
gcccaggttcgacactgggaccccatacgcttcctaggcaagatggagaacctggacaag
tgggtgtggaccctgtctgtgctcagtgaggtggctcatgtgtgtgagctggctgactca
gaccccatggtgttagctgagatgaccatcaggctggccatggtgatggagagcactgcc
gactccactgtccactcagcctcaagcgaagacaacagcgtggagtcgacacccatagag
aaaaacacggacactttttcaatgttcaagaagtcgacagcggagcagctgcagtcagtg
tgggacgtggtagagagaggtctggagggagtgatcagaggctggaccagactactgccc
tgtgacggatcagccatctctgacacggtcttcatgcagaagtttgctgggctggccatg
cgttcccctgcaggaggaggagacggagagagggtgaagaggccctccctgtctctctct
ctctctctgatcccaatggacctgcatctggaactgctgtctgtccagcacagagtctcc
ctcaagctgctcaacatctgcccagctgagctgcagcagcatgctggtgacagtaggaga
actatgaggccccctggtggtgtggagacacctgaaaccatggctaacagagccagagga
gagtcagtgcttctggagcggatcagaaagaataagatctccatagctctgttcctggtc
cagaacgctctgctgtcccacaagaaggaccagaacagcagcgccaccaagaggctgcta
gaggaggctgttgtcctgatagagaaggcagaggtggaggagaggaagctgttcagctcc
tcaggttcgtcggagaggaaggagggaggaggagaggagaagagaaacactagacctcct
ccttctcctatcctcctgtcccgtacctaccactccatgaccttcattcctgcaccctat
gccctggaggaacaggtgtgctggtaccatatctatgcacgtgaggctgagggaatcaac
ctgaaagtcagactaggagacaacaacctggtgggcactggagacgaggttcctgcatca
ggggagcgactgctacgagtggaatgcttggagccgaaccagaagtatgtgtttgctgta
gcagcctatgacgccgggggtaaactggtgggcaatgccattggagagacaaccaggccg
ctgctggcctccctgcctctgccgctgctcaccacctgggcacacctggcacaggcagcg
taccagacagggcaacatgctctagccaagagagcctgcagtgagctgtggagccacttc
acccagcctaaaggtcttcaggagccaggggccactttagacgggctagctcagaccggg
ctgcgtttggagactctgcagcgctcctctcctctcctcctccacctcttcctctcctcc
atccttatgcagacagagatccacatacaggagggtgcgctgttctgtgacaccctcagt
gacaggggaccacttatttggggacaggaggccaggttggcagagtgtgaacggatgctg
gtggccatagacctggctctgtggctgaatgacagcagcaccgccctgcaggccgtggtg
gggtgttatggcctgctggccccgctcatgtttcaccagatcccagcagagcctgtttta
caggtgctgatgaagtgcctggcagtgctgacagagatctcaggagttgtcaaacagaaa
cgccaagccaccacctcagagtctctccttcacatgatagcctgtataacatattatgtt
gccaaggcccttcgcaccctggagaagcaccgtgtggcagcaacagtgatcgaacaggga
aagaaactcctccatgaggtcctggagacccagggacccagcaagcccctgccagtggag
ccagactggattgagaagcagctgaagaaggcaggcagcatccagggagaggaggagcag
aatgaacagatgaaggctctggagggcagtgccatgaagaacaagaggactggagccttc
atgcagcatgacagctcagcctggagcagggcggtggcccatactcatgaactgactgga
caggaggaccccattctgctgtaccccatcgtcaccaacagccctctgaaggctgctttc
aaagatttgatgaagttcaaacgcaaggcgtgcttcatggagtttgctgtgctgctgctc
cagaggaccatgcaggaagaccatctagagctggtcctgcagtggggacacgacatattt
ggctggcttagcaggagggatgagggactgacagggcctaagaagggcccaggggacaga
tcaacctcagggaaagaactgaagaagttctcctcttccgtcatggagtacaagaataat
aaagccagtacattctggagtgacaagaagaggaaagagtttctccagaagaaacagctg
actgctctgaaagcacagaacacagagagggagtataaggcggtggaaaccatgctgaac
cagctagcccccctggtgcgccgtcaccagcgtcggaggtgtctgagacaggtgtgttct
gaggagtggctgtggaggtgtcacctcaaccttagcaccgccagggctcacctgggactg
ctgaggaggagcctggagaaccaccatggccttggggccttacaacacagctacagccag
ctgcctctgtcgttgttctccctggcccactctggtactctggtgaggtggaggaacatg
cctcagcacatcggagtccctgacctgatccccccgccccccaaagccacgacccagccc
cgccttagaacctaccgcagggccatcctccacaaggccaaggagagcggacaggctgcc
accaccaccagtggagaggacttcaacacgacagagagcagtgagcaggacagtgagcag
gactctccccgtgcccagccggccgtggactcggactgtagtgagccctcagtgatgacc
acctccccgaccagacgcaccgtcactcagctgctggagtcactcaacaaggctgccctg
cacctccgcagagccatggtacttgcccatcgtgggggccactggacaacgttgcagtgt
gtgtgtcggacactatgggaccagggctgtaccatcactctgctagtagacaggggtgca
tccatggagccccccatccctttaacattggaccagctctacactgtcctcacccctttg
tttgcgctggctacagacctcctcatgaacatgatggagaggatgcagctctggcaggtg
tttgaagtgaaggatgaggagatggaggccagcatgcacttctccgccccgatggatgac
ggtaccttggtggacctgagatggatcaggagcctcacccttcacacccttgagctactc
tacctcgaggctcgctgggagactctggctcacctcgccctgctcttcaactcacacaca
caagagtgctacacccacatgatcactcctatcctggtccatgctcagaggagactgctg
gagaggatcagctacttcggaggacctccggtccctcagccacacctcataaaaacgcag
aacgtcactggagagaagatcacctgtaagaactatgcagggagacagctgctgaattgc
tggactccccctgctgtgccagcccccagacgggggtgcaacactcccaccaacccaaac
gctgctgagctcctcgaactctctgaggtgcgccgggccatgtgtgtggtgtgtgttcct
ctggatgtggaggatacactgtgttgtttcagggaggccctggagaagggcaatcacact
ctgcggatcttccaacacagtcgcacactgctgctactgctgctggcacacacacagccc
ttgtttgaggttccattctgtaaggagaacagtagccaggctcagggtcatggcagggtg
gactttaacgtgacggtgtgcactgccccgtccatcggccctccagacctgaccactgag
gactacagcaccctgagttctgtctacggctgccctctggcccccaaccagatacacacc
gtcatcaactcctatagcaactccatacaataccttcaggccaacaaccatgactctctc
agggtacaggctctacatgacctgggaaacctgcactattataatggaaacagaagggca
gctcatttctactggagccaggcagtggactgtgccctgcagagctctggggtgctagac
tcatgggacggggtgtcgtggggtacaggttccctccaacaccaacccaccctgaggcag
gctggagtctggggctgtctgcagggagctttactgaccgctaagatcgcacagtatgcc
ttgacctctaatatcagtcagcgcacaaaatgctgcctcctatctgcccagcttttcaag
tgtctcctgcgtgcctccctgccccacccacagagtgacctgcagtactcatcctatact
gtaggagaggagctggttcctggtctggacctgttctctgaaccggaccgaggacacctg
ggaaccactgtgtccagcctggacttcctctgccactggctctacacctcaggacaccat
ctcacagccctgcctatgctggctctctacctgcattttgtggggactgtgtgccgagac
ccacacctcaccattaaaggaaggatactgaaggtgaaggtgctgacagagctggggcag
tactgtcaggccatgaaggagacatcccagatgactcagggagaggagatcccactgccc
catggatgttacagcggcatagagaaacatgtgacgttcagaaagttcttcaccaacaag
tctctcatggactctgcaaacatgcaggccctggaggacttagtgaaccgtcgtctgggc
acagaggccagtgttctgtatggctccagactgagcaggcatgtcaccctggccagagta
cagctcatactggccctcagctccaccatacactccctgcctgaaccccaagatatctca
gatggggcggtgcgttgcagtgttgtgaggaggacatccagtaccccaggtatccctaac
tctccccccggagagagggatagtgacagtgacaagtcacacggtggctccccaaccagg
aagaccagggagcccaaaggactgcacctcgacccccagaaagacaagctcaccctcagc
aaagtcaaggcgttactgctgagagaggtgtgtcgtctcctgagcccccagctgcagctc
tgtctctcctctcagccccactctgaccctgaggaactggagctggctatagacacctac
ctgctactgtctaacctctacctgcagcagggcaaaaccgcttacagtgctgacatggca
gtgtctgctatgagtctgctccagaactctcccatcactctgaggggaagcccctcccct
gtccacagacccctctcctcttccctcagaagacagtccagacctaagagtgaacagggg
ggtatgagggaggcagagcaccatgcccccagcccacagcaaggtgactgtccccaggca
gtagaggccagagagaggatggaacggtctctgtggctccgctgtagactggctgtggta
cgcagtctggtcgcacacatccctggcactgccatctacccaggtatggacagcagtgtg
gtggccacaaagctgttgaaggagggtctacaggaggctgaggtgtggggagacccagac
accagagccctgtttctcctccaaggggctagactggacacacacagaggactgccccgc
gagaacagcacctcactgctacaggaggcagtgagtcttctgtcgggtcactcctgtctg
cctcctggctccagtgtaacgttggcccaggccactctactgctcagtgatctgagaggg
acaggcagccaggccctacacctcctcacacagaaactactacagcaacagctgtgtgtg
ttgggggagagtgtgtcattgggagagagtggcagagtaatcctccctccagcccctggt
ctctctaacatctacctcccacatctcccactactggccaaggccaccatgcgcctgggt
cactgcttggctgtacaggccatgaccagcgcccctgcctccagcgtgtctagccccaca
agctcctctaccccctgggtgtgtgctcaggaggtgctgcagtcagccctgctcctttcc
caggcctgtgctaccagagacagacagctggaggctgatatcctctactgcaaggggatg
gtggagcgctgtctgatgtctctcagtgacttccagcctcagacagttgcagtgacacta
ctggagagcatcaatatctctctgtcccagagtcacaatctacagctgatccgtaagtgt
tatctggagatggccttagtgtacctgcaccagtgggagcagagcagcccagcacctcag
gaccagcagaaccccgtcccaccttcaccacctaaaaaggccatactgaagcctccaggt
tggaagcgtgtcaggactactctgaacagaggcctgactccaggggaggcctacttattg
ctctactgggtctctgttagagctgctactaaggcgtctgaagccatgtccacatgtagc
cagctgtgtggtagtaccggagctaaaggaggacacctgcctctcatctccctcaaggtc
ctgcctgactttgcctccaacgacctgctcaacccctgtggagggatagacgtgatgatg
aggactgtctccagcccgtctccagagcttgatcctgggctgagcagcaggaaacgctcc
caactcacatgggtccacctgtcccgctactacaaacacctgttcaacctgcagcacatc
gccatgcgcccagtggtgccccagtgtgtggagggcctggtgtcccagtcagaagacagt
agtttggcgctgaggttggttcagctccagaccttcttctgttcccacatggtggcctac
agagagtcctgctgcgcccctgaaccacccactgaaatcatcatgcagccacagattata
cagatgtgtcccacagtgagaggcactatgggagctcagatgtacccctggtcctttgct
gacaggaagcagctgtgtatccagtggcaccggcctgctctcagccccacccaggaagac
acggacacggtcatgctgctgtttggtctgaacaaagtgccactgtcggccatgagggca
acagcctgcgctgtcatagagctgcagtgtggacagaaactcgtcagcatggcaaaactg
tgcacggtccatgctcagctggcctcagcctgtgttgggggtaacatctcctctccgcct
gctgccagtagcgccccctcctcccccagccccaagatggagaggcaacgccgcaccaag
atcccagacaaggctgttacctccagccctcccatacagatgctacaggagaagaccagg
tgctgctgtgctgctataaaggatttactacaacctggttcagaggcagctgttctcact
gaggttccgtttgaggccagcctacatagtctgtgtgatctggagcgctgcttcaaccca
gccagtggagccactgtggaggaaaacacactgataacatggctcatgtccctgctagtc
tga
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