Coregonus clupeaformis (lake whitefish): 121579747
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Entry
121579747 CDS
T08357
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121579747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579747
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121579747
04812 Cytoskeleton proteins [BR:
cclu04812
]
121579747
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
121579747
Cilium and associated proteins [BR:
cclu03037
]
Motile cilia and associated proteins
Sperm associated proteins
121579747
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
121579747
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Paralog
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
Microp_apicomplexa_10
ABC_tran
VapE-like_dom
Ras
AAA_16
AAA_23
AAA_22
Colicin-DNase
AAA_29
SAM_KSR1_N
Motif
Other DBs
NCBI-GeneID:
121579747
NCBI-ProteinID:
XP_041750534
LinkDB
All DBs
Position
13:53949223..53975480
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AA seq
521 aa
AA seq
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MDHMSSPVRFRSSFKPDNQLSSLSIEEPEDAELAYTMRDLPPVPHPRGASVDQHTTPGRH
TPVIDQEPEGTGPGMGQPPHTLGGTPLLPRPSPGGPPPFAPPRPSRAPQEGEFEPLQLRR
YQLTSMGSRSMDSSPQSRPRSPWGCFDPYDSAEDMNREYVGFATLPNQVHRKSVKKGFAF
TLMVAGESGLGKSTLVNSLYLTDLYNDRKVLNAEERITQTVYITKHTVGIEEKGVRLRLS
IVDTPGFGDAVNNTESWKEIEDYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGH
GLRPLDVDCMRALHEKVNIVPVLAKADSLTPTEVRRKKMKIREEIEKFGINIYQFPDCDG
DEDEEFKMQEQLLKDSIPFAVIGSNVQVESKGRKFRGRLYPWGVVEVEDPAHSDFLLLRN
MLVRTHMQDLKDVTRETHYENYRAQCIQNMTRMVVQERKRSLHDKIRSDSSVDFPMTPLP
LAPVDSETERLIWQKDEELRRMQEVLERIQEQMQHRQKPDY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatgtcatcgcctgtcaggttccgcagcagcttcaaacctgacaaccagttg
tccagtctgtctatcgaggagccagaggatgcagagctggcctacaccatgagagacttg
ccccccgtcccccatccccggggtgcatctgtggaccaacacacaaccccgggacgccac
acacctgtcattgaccaagaaccagagggaaccgggcccgggatggggcaaccccctcac
accctgggagggacacccctgcttccccggccctcccctggtggcccccctcccttcgct
ccccccaggcccagccgtgccccccaagagggagagtttgagccgctgcagctgaggagg
taccagctgacctctatggggtcgcggtccatggactcctcccctcagtcccgaccacgc
agcccctggggatgcttcgacccgtacgactctgcagaggacatgaacagggagtatgtg
ggctttgccactctgcccaaccaggtacacaggaagtcagtcaaaaagggctttgccttc
accctcatggtagcaggagagtctggtctgggtaaatccactctggtcaacagtctgtac
cttacagacctctacaacgacaggaaggtgctgaacgcagaggagcggatcacacaaaca
gtgtacatcaccaaacacaccgtgggtatcgaggagaagggggtcagactcagactctcc
atcgtagatacaccagggtttggtgacgctgtcaacaacacggagagctggaaagagata
gaggactatattgaccagcagtttgagcagtacttcagagacgagagcggcttaaacaga
aagaacatccaggataacagagtccactgctgcctctacttcatctctcccttcggacac
ggtctgcggccgttggatgtggattgtatgagggctctgcatgagaaggtgaacatagtc
cctgttctggccaaagctgacagcctcacacccactgaggtccgcagaaagaaaatgaag
atccgagaggagatcgagaagtttggtatcaacatctaccagttcccagactgtgatggt
gatgaagatgaggagtttaagatgcaggagcaactgctcaaggacagtattccttttgct
gtaattggcagtaacgtccaggttgagagtaaaggacgcaagttcaggggtcggctctac
ccctggggtgtagtggaagtggaggacccggcccacagtgatttcctgctgctgaggaac
atgttggtgaggactcacatgcaggacctgaaggatgtcaccagagagacacactacgag
aactacagagcacagtgtatacagaacatgacacgcatggtggtgcaggagaggaaacgc
agcctgcatgataagattcggagtgatagcagtgttgacttccccatgaccccactccca
ctggcccctgtagacagtgagacagagaggctcatctggcagaaggacgaggagttgagg
aggatgcaggaggtgttggagaggatccaggagcagatgcaacacagacagaaaccagac
tactga
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