KEGG   Coregonus clupeaformis (lake whitefish): 121579748
Entry
121579748         CDS       T08357                                 
Name
(RefSeq) lissencephaly-1 homolog B isoform X1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu00565  Ether lipid metabolism
cclu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    121579748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121579748
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121579748
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121579748
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121579748
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_Vps41 Beta-prop_Nup120_160 WDR90_beta-prop_4th LisH Beta-prop_SPT8 LisH_PAC1 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH DUF2570 SutA-RBD LisH_2 LisH_WDR26 DUF7800
Other DBs
NCBI-GeneID: 121579748
NCBI-ProteinID: XP_041750538
LinkDB
Position
13:complement(53996048..54040689)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaaagacaacgagacgaactaaaccgagcgatagcagactacctacgc
tccaacggctatgaggaagcctactccaccttcaagaaagaggctgagttagatatgaat
gaggagttagataagaagtacgctggtcttttggaaaagaaatggacctctgtcatcaga
ttacagaagaaggtgatggagctggagtcgaagctgaacgaggccaaagaggagattact
ctagggggtccggtggcccagaagagggaccctaaggagtggatcccccgtcccccagag
agatacgccctgagcggccaccgctcccccgtcacacgggtcatcttccatcctgtcttc
tccgtcatggtcacctcctccgaggacgccaccatcaaggtgtgggactatgaggcaggg
gactttgagcggacactgaagggccatacagactctgtccaggacatctcctttgaccag
acgggcaagctgctggcttcctgttctgcagacatgaccatcaagctgtgggacttccag
ggcttcgagtgcatccgcaccatgcacggtcatgaccataacgtgtcgtctgtagccatc
atgcccaacggagaccacatagtctccgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagacgtttacaggccacagggagtgggtgaggatggtc
cggcccaaccaggatggttctcttatcgccagctgttccaacgaccagacggtgcgtgtg
tgggtggccacctccaaggagtgtaaggctgagctgcgagagcacgaacacgtggtggag
tgtatcgcctgggcccccgacaccgctcaccctaccatcctggaggctaccggctcggaa
agtaagaagaatgggaagtccggtccgttccttctctctggctctagagataagaccatc
aagatgtgggatattagcactggcatgtgccttatgactctggtgggtcatgataactgg
gtgcgtggagtgttggtgcaccctggaggcaggttcatagtgagctgtgctgatgataag
actctgaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatatgcaccggactgctccatacgtggtaacaggcagcgtt
gatcagacagtcaaagtgtgggagtgtcgctga

DBGET integrated database retrieval system