Coregonus clupeaformis (lake whitefish): 121579750
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Entry
121579750 CDS
T08357
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121579750 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121579750 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121579750 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121579750 (vtnb)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121579750 (vtnb)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121579750 (vtnb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
121579750
NCBI-ProteinID:
XP_041750544
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All DBs
Position
13:54379234..54465489
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AA seq
457 aa
AA seq
DB search
MKLAVVLLALALASAFAAEESCVGRCNSFNPMAKCQCDSMCRYYSSCCVDFDNACPRKIA
RGDTFDAPEDDVVNTPITAINTNPGTMVDPETTNIPTVMNTTAVPTTTLAPTTTIHTPTL
PTDPEAVPCSGKRFDAFLQLKNGSIYAFRGDYFFELDERAVVPGYPKLIYDKWGIRGPID
AAFTRINCQGKTYIFKGNKYWRFEDDVLDDDYPRDISVGFEKVPSDVDAAFAIPAPSHHG
KEKVYFFKGDQYYQYEFKHQPSHEECVRLTKSSPSVLFTHYTNLYYDDTWENLFTMLFQG
LQGHKKGPRFINKDWVGMKSPIDAAMVGRLYISPKPTPSPSPAPRRRANRRRKDRRRGQR
GRARQSRSAYFEDFFLDDDDWMGGGFTYDSDYSDYIPSHTTHDKTLPVQNVYFFKKDKYY
RVDLQTKRIDFASPPYPRSIAKYWLGCKQEPDREEKR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggcagttgttctgctggcactcgcgctggcctcggcgttcgctgcagaggag
tcgtgtgtgggtcgttgtaacagcttcaaccccatggccaagtgccagtgtgactccatg
tgtcgctactacagcagctgctgcgtggacttcgacaacgcctgccccaggaagattgcc
cgcggtgacacctttgatgccccagaggacgatgtggtgaacacccccattacagcaatt
aacaccaatcctgggaccatggtcgacccagagaccacaaacattcccacggtcatgaac
acaaccgctgtccccaccaccaccctggccccgaccaccaccatccacacccccaccctc
cccactgacccagaggcagtgccctgcagcgggaagcgctttgacgccttcctccagctc
aagaacggatccatctacgccttcagaggtgattatttcttcgagctcgatgagagggcg
gttgtccctggttaccccaaactgatctacgacaagtggggcatcagaggacctatagac
gctgcctttactcgcatcaactgccagggcaagacctacattttcaagggaaataagtat
tggcgttttgaggatgatgttttggatgatgattaccctcgggacatctctgtagggttt
gagaaggttccatctgacgtcgacgcagccttcgccataccagcacccagtcaccatggc
aaagagaaggtctacttcttcaaaggggatcagtactaccagtatgagtttaagcaccag
ccgtctcacgaagagtgtgtgcgcttaactaagtcttccccatcagtgctcttcacgcac
tacaccaacctgtactatgacgatacctgggagaacctattcacaatgcttttccaaggc
ctgcagggccacaaaaagggcccacggttcatcaataaagactgggtggggatgaagtcc
ccaatagacgctgccatggtgggccgtctctacatcagccctaaacccactccctctcca
tcccccgcccccaggagacgagccaataggaggaggaaggacaggaggcggggccagaga
ggcagggccagacaaagtcgctctgcgtactttgaggatttttttttagatgacgacgac
tggatgggaggaggcttcacctatgactctgactacagtgactacatcccctcacacact
acacatgacaagacactgcctgtacagaacgtctacttcttcaagaaagataaatactac
agggtggatctccagaccaaacgcattgacttcgccagccctccctacccacgatccatt
gccaagtactggctaggctgcaaacaggagcccgaccgggaagagaagagatag
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