Coregonus clupeaformis (lake whitefish): 121579765
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Entry
121579765 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579765
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579765
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121579765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-RING_6
RING_XB3-XBAT31
Prok-RING_4
Zn_ribbon_6
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121579765
NCBI-ProteinID:
XP_041750580
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All DBs
Position
13:complement(22034602..22043058)
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AA seq
428 aa
AA seq
DB search
MKLQTQYDRSDSKRTLKSRESPTVMQPNSSELGAHQAGHGLSLTLLPELLTRTPAGATGG
SAIPETSGEVRVPILSSGPWESCRGGASSRRSRASSRTSSHSHSHSHGGGHQHSHSEADP
ADADLESGEPSTSFSELRYLFRWVQKSLPFIIILCAKLVIQHAQGLAVGVGLFTTFLYAN
KNIQTQVFLQDRRSKIECVWLLLFLASSTLLLYYTFLTETLYYCLIFLSPAVEPLGFWEV
LWVVGVTNFTLKFLIMGFKCLILLLPSKLVTYRAQGRWYMLTEEVGQLYQAVAPTPLWFR
YLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKVCPLCRTAITDKVHKWRDGA
TSPYLQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccagactcagtatgacaggagtgattccaaaagaacgttgaaatcgagggaa
tcaccaactgtgatgcagcctaactccagcgagctgggtgctcatcaggcaggacatggt
ttgtccctgacattactgccagaactactgaccaggacaccagcaggggctaccgggggc
tctgctatcccggagactagtggagaggtccgggtacctatcctctccagcgggccctgg
gagtcatgtagaggaggggcgtcatcccgtaggtccagagccagttccagaaccagttcc
cacagccactcccattcacatggtgggggacaccagcactcccacagtgaggcggacccg
gctgatgctgatctggagtcaggggagcccagcacctcattctcagagctgcgctacctc
ttccgctgggttcagaagagtcttcctttcataatcatcctctgtgctaaactggtcatc
caacatgcccaaggtctagctgttggagttggcttatttacaacttttctttacgcgaat
aagaacattcaaacccaagtctttcttcaggatcgtcggtcaaagatagagtgcgtatgg
ctgctcctcttcctggcgtcctccacactcctgctttactacacttttctcactgagaca
ctttactattgcctcatcttcctgagcccggctgttgagcccctgggtttctgggaggtc
ctatgggtggtgggcgtcaccaacttcacactcaagttccttatcatggggttcaagtgc
cttatcctactgctgccctctaaactggtgacctacagagcccaggggcggtggtacatg
ctgactgaagaggtgggccagttgtaccaggctgtggctcccaccccgctgtggttccgc
tacctggtcacctaccagaaagtggatggaaacactggcctcaccctgggagtcctgctg
gctctggtctacttcatactcaagcttttaggattgtatggacagtgggggtctttccag
aaaacagtgaggatatttctaagtggtgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagagtacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
gtgtgtccactctgccgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacctccaaatctactga
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