Coregonus clupeaformis (lake whitefish): 121579819
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Entry
121579819 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579819
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579819
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121579819
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Arabinose_bd
Motif
Other DBs
NCBI-GeneID:
121579819
NCBI-ProteinID:
XP_041750665
LinkDB
All DBs
Position
13:25827359..25862202
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AA seq
316 aa
AA seq
DB search
MSRPSSAGGGGGGLGAGKAGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAA
LPGQAAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYVSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctgcgggcggtgggggcggaggactcggcgccgggaaagcagga
ggaggaaagcacggaggttcgggaggagctgctgcctcagctgcagccgccggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcagcg
ctacctggacaagctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gttctgccaccgattctgcaatgccaggccggacatctagtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcctctactctaccgtttccttgtaagtacgtgtcagccggatgcctg
ctgtccctccaccacagcgagaagcctgaacacgaggaggtgtgtgagttccgtccctac
acctgcccgtgccctggggcctcctgtaagtggcagggctccctggaggccgtcatgccc
cacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacattgtcttcctg
gccacagacatcaacctacctggggccgtggactgggtcatgatgcagtcctgcttcggc
caccacttcatgctggtcctggagaagcaggagaagtatgagggccatcagcagttcttt
gctgtggtgctgctcatcggcacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatccacgatggt
gtggcggccgccatcatgaacagtgactgtctggtgtttgacacgtccatcgctcacctg
ttcgccgacaacggcaacctggggatcaacgttaccatctccatgtgctga
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