Coregonus clupeaformis (lake whitefish): 121579848
Help
Entry
121579848 CDS
T08357
Name
(RefSeq) HLA class II histocompatibility antigen gamma chain
KO
K06505
CD74 antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121579848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121579848
00535 Proteoglycans [BR:
cclu00535
]
121579848
CD molecules [BR:
cclu04090
]
Proteins
121579848
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Others
121579848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC2-interact
Thyroglobulin_1
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
121579848
NCBI-ProteinID:
XP_041750710
LinkDB
All DBs
Position
2:22829966..22837343
Genome browser
AA seq
282 aa
AA seq
DB search
MEEQQQPKHDDDALLERAGSQDVILPITTSTRASNSRAFKVAGFTVLACLLLAGQALTAY
LVFNQRGQIHDMQKSNDNMRKQLRNRPPAVAPVKMQMPMFNMPRMIDFTDEDTKTPMTKL
EDTATAIVSLEEQVKDLLQNPQLPQFNETFLANLQSLKDQMEETEWKGFETWARYWLLFQ
MAQEKPPASPTPQPASGLQTKCNLEMSAHPHKVGTYLPQCDEQGNYLPMQCWHATGFCWC
VDKNGKLIEGTSVRGRAICDGVPHQRMAAYPRMMQLKEYNDE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaacagcagccgaaacacgatgatgatgcgctcctggagcgcgcggggagc
caggacgttatcctcccaataacaacctccacaagggcctctaacagccgtgcatttaag
gtagcagggttcacggtactggcgtgtcttctcctagccggccaggccctcactgcctac
ctggtcttcaaccagaggggccagatccacgacatgcagaagagcaacgacaacatgcgc
aagcagctgagaaacagaccaccagctgtggcccctgtcaagatgcagatgcccatgttc
aacatgccacggatgatcgacttcactgatgaggacaccaagactcccatgacgaaactg
gaggacactgccactgcaattgtgagcctggaggagcaggtgaaggatctgctgcagaac
ccccagctgccccagttcaacgagacgttcctggccaacctgcagagcctgaaggaccag
atggaggaaactgagtggaagggctttgagacctgggcgcgctattggctgctcttccag
atggcacaggagaagccccctgcttcccccacacctcagccagcctctggcctgcagacc
aagtgtaacctggagatgtctgcccacccccataaggttggcacctacctgcctcagtgt
gacgagcagggcaactacctgcccatgcagtgctggcacgccaccggcttctgctggtgt
gtggacaagaacggcaaactcatcgagggcaccagcgtgcgtggcagagccatctgtgac
ggagtcccccatcagaggatggcagcttaccccaggatgatgcagctgaaggagtacaat
gatgagtaa
DBGET
integrated database retrieval system
