Coregonus clupeaformis (lake whitefish): 121579849
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Entry
121579849 CDS
T08357
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1 isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121579849
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121579849
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121579849
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121579849
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121579849
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121579849
CD molecules [BR:
cclu04090
]
Proteins
121579849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
Ig_ADGRF3
Ig_VEGFR-1-like_5th
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
121579849
NCBI-ProteinID:
XP_041750712
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Position
2:complement(22866127..22892292)
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AA seq
991 aa
AA seq
DB search
MVLYLAFLLGILPTAAQAQWRHPVIKLNSQLVVGPEVVLNPGTPLVLRCEGDGPVNWLTR
LAKHKRFISKGNGRVRTFRVDRPSAEHTGTYKCEYTSVNVKGQDLFSTVHVYVKDPASLF
WTSSTSLRVVRKEGEDHLLPCLLTDPGATDLGLRMDNCTSVPPGMNYTADPRRGILIRNL
QPSFNADYVCSAKLHGVERTSKAFSINVIQRLRFPPYVFLEKDEYVRIVGEKLRIHCTTH
NPNFNYNVTWNYSSKKRSTIEENVQSKDSRLDIESILTIPAVDQSDTGNITCIGTNEAGV
NSSATYLLVVEEPYIRLSPQLSSKLAHQGLSIEVNEGEDLKLSVLIEAYPQIIAQSWDTP
TASPTQEHIFTRYNNRYSATLLLKRMIAQEQGQYTFYARSAMANASITFQVQMYQRPVAV
VRWENITSLTCTSFGYPAPIILWYQCSGIRATCNENNTGLQMPAPLLAQTVEVQREKYGP
VEVESVLNVGPSNRRMTVECVAFNLAGVGKDTVAVEVPDNVLTSILSGAAGVLALLILLL
IILLYKYKQKPRYEIRWKIIHASDGNNYTFIDPSQLPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGEDDNVIRVAVKMLKARAHSDEREALMSELKILSHLGQHKNIVNLLGAC
TQAGPVLVITEYCSHGDLLNFLRHKKETFLNFVMNMPEVPEETSDYKNVCEEKQFIRSDS
GISSVSSDSYLEMRPGPQPVNSSLDSLCEESGPDSWPLDMDDLLRFSYQVAQGLDFLAAK
NCIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCLY
TVQSDVWSYGILLWEIFSLGKSPYPSILVDTKFYKMIESGYQMCRPDFAPPEMYTIMKMC
WNLQPTERPTFSKISQLIERVLGEQPEHPDQQQMMYQNIQQQDMVIEELELCDDDGDDVD
ETTFCDGSCDQSCEHEEEEQPLMKTNNYQFC
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtacctggcctttctgctggggatcctgcccactgcagctcaagcacaatgg
cggcatcctgtaatcaagctcaactcccaacttgtggttgggcctgaggtagtactgaac
cctggcaccccattagtcctgaggtgtgagggggatgggccagtcaactggctgacccgg
ttggccaaacacaagcgcttcatctccaagggcaacgggagagtcagaaccttccgggtg
gaccgtccctctgcagaacacactgggacctataagtgtgaatataccagtgtgaacgtc
aagggccaggacttgttctctacggtgcacgtgtatgtgaaagacccagccagcctgttt
tggacaagcagcacgtccctgcgtgtggtgaggaaggagggggaggaccacctgctcccc
tgcttgctaacagacccaggggccacagacctggggctccgcatggacaactgtacctct
gtacccccaggcatgaactacacagcagacccccgcagaggcatccttatccgtaacctc
caacccagcttcaacgcggactacgtctgcagcgccaagctccacggggtggagaggacc
tccaaggcattctccatcaacgtcattcaaaggctgcgtttcccaccttacgtattcctg
gagaaggatgagtatgttcgtatcgtgggagagaagctgagaatccactgcaccacacac
aaccccaacttcaactataacgtcacctggaattacagctccaagaagagatccaccata
gaggagaatgtccagtctaaggacagccgtctggacattgagagcatcctgaccatccct
gcagtagaccagtcagacacagggaacattacctgcattggaaccaacgaggctggagtc
aacagctctgccacctacctgctggtcgtagaggagccctacatccgtctgtccccccag
ctgtcctccaagctagcccaccagggcctgtccatcgaagtgaacgagggggaggacctg
aagctcagtgtcctgatcgaggcataccctcagatcatagcccagagctgggacaccccc
acggcgtcgcccacacaggaacacatcttcacacgctacaacaacaggtattccgctacc
ctgctgctaaagagaatgattgcacaggagcagggccagtacaccttctatgccaggagt
gccatggccaacgcatccatcacattccaagtccaaatgtatcagaggccggttgccgtg
gtgagatgggagaacatcaccagcctcacgtgcacgtcgttcggttatcctgctcccatc
atcctctggtaccagtgctctggaatccgagccacgtgcaatgagaacaacacaggtctc
cagatgcctgctcctctcctggcccagacggtggaggtccagagggagaagtacgggccg
gtcgaagtcgagagcgtcctgaacgtgggaccgtccaaccgtagaatgaccgtggagtgt
gtcgccttcaacctggccggagtcggcaaagacaccgtcgccgtggaagttcccgataat
gtgttgacctccatcctatcgggagcagctggtgttctggccttgctcatcctgctactc
atcatcctgctctacaagtacaagcagaaaccgagatatgagatccggtggaagatcatc
cacgccagtgatggaaacaactacacctttatcgacccaagtcagctgccgtacaatgag
aagtgggagtttcccagggacaagctcaagttagggaagatcctaggagccggggccttt
gggaaggtggtggaggccacagcttatggtctgggggaggacgacaacgtgatacgagtg
gctgtcaagatgctcaaagccagggcccactcagatgagagagaggcactgatgtcagaa
ctgaagatcctgagtcacctgggacagcacaagaacattgtcaacctgctgggagcctgc
actcaggcaggacccgtactggtgatcaccgagtactgtagtcatggagaccttctgaac
ttcctgcgacacaagaaggagaccttcctgaactttgtcatgaacatgccagaggtacca
gaggagaccagcgactacaagaacgtctgtgaggagaaacagttcatcagaagtgacagt
gggatctccagtgtgtcttctgacagctacctggagatgaggcctggtccccagcctgtc
aactcctctctggactctttgtgtgaggagagtgggccagactcgtggccattggacatg
gatgacctgctgaggttctcctatcaagtggctcaaggcctggacttcctggcagccaag
aattgtattcaccgggacgttgcagccaggaacgttctcctgacagaccgccgtgtggct
aagatctgtgacttcggcctggcacgtgacatcatgaatgactccaactatgtggtgaag
ggcaatgcacgtctgccagtgaagtggatggctccagagagtatctttgattgtctctac
actgtccagagtgacgtctggtcctatgggatcctgctatgggagatcttctctctagga
aagagcccctaccccagtatcctggtggatactaaattctacaagatgatagagtctggt
tatcaaatgtgccggccagactttgcccctccagagatgtatacaatcatgaaaatgtgc
tggaatctgcagccaacagagcgacccaccttcagtaaaatcagccagcttattgagaga
gtactaggagagcagcccgaacatccagaccagcagcagatgatgtaccagaacatccag
caacaggacatggtgattgaggagttggagctgtgtgatgatgatggtgatgatgtcgac
gagacaacattttgtgacggctcctgtgaccagtcctgtgagcacgaagaggaggagcaa
cctctgatgaagaccaataactatcagttctgctga
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