Coregonus clupeaformis (lake whitefish): 121579916
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Entry
121579916 CDS
T08357
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121579916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121579916
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121579916
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
121579916
NCBI-ProteinID:
XP_041750829
LinkDB
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Position
13
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AA seq
427 aa
AA seq
DB search
MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEGEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQHSPAHYSVPHGYPN
IVATYGRGYTGFAPSYSYQFPGFPATAYGPVAAAAVAAARGSGRGARGRGGYMAYPQNAG
PGFPDYGFYSAPSDQRGAPCSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKS
PGGNPPRPGGFPGANSPGPVADLYGPGGQDSNVGNYISAASPQPGSGFGHSIAQSLSGGP
GKTGRSF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgggagtcaagccacatctggaagcccaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgt
tccagaggatttgggttcgttacgtttgcagatgctgccagtgtagataaagtcttagct
caaccacaccacgaattagactcaaagacgattgatcctaaggttgccttcccccgacgc
gctcaacctaagatggtcacaagaacaaagaaaatatttgtgggcggattgtcagccaac
acagtagtggaagatgtgaagcaatattttgaacagtttgggaaggtagaagacgccatg
ctcatgtttgataaaactactaacagacatagaggattcggctttgtaactttcgagggc
gaagacgtcgtagagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggcacgcgagggagggcc
aggggcctgccctacaccatggacgccttcatgctggggatgggcatgctgagtgagtat
ggaccaacactactccagcacagtccagcacactactcagtcccacacggttaccctaac
attgtggcgacgtacggccgtggatacactggattcgccccgagctacagctaccagttc
cctggcttcccggcgacggcgtacggaccggtggcagcggcagcggtggcggcagcgcgt
ggctcaggtaggggggcccgtggaagaggcggctacatggcgtacccgcagaacgcaggg
ccaggctttcccgattacgggttttactctgcgcccagtgaccagaggggggcaccctgc
tcctttgcggactatggctccctggggccccaggcggctcagatgctgcacagtgagcat
gccacctccgcctgcaactcccccctccagcacctgcacagcccggatcagtttaagagc
ccagggggaaacccacctcggcctggaggcttccctggtgccaacagccctgggcctgta
gccgacctgtacggccctggaggccaggactccaatgtgggcaactacatcagtgctgct
agcccccagcctggctctggctttggccacagcatcgcacagagtctatctggtggtcca
gggaagacaggccgaagcttctaa
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