Coregonus clupeaformis (lake whitefish): 121579944
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Entry
121579944 CDS
T08357
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121579944 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121579944 (myo5aa)
04131 Membrane trafficking [BR:
cclu04131
]
121579944 (myo5aa)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121579944 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121579944 (myo5aa)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121579944 (myo5aa)
mRNA cycle factors
P-body specific factors
121579944 (myo5aa)
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Myosins
121579944 (myo5aa)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121579944 (myo5aa)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121579944 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
HTH_17
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121579944
NCBI-ProteinID:
XP_041750891
LinkDB
All DBs
Position
1:93243332..93290022
Genome browser
AA seq
1903 aa
AA seq
DB search
MEKGHDSCSMAASELYTKFARVWIPDAEEVWKSAELTKNYKHGDSTLHLTLEDGMDIEHK
LDDKTKNLPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSKLIYTYCGIVLVAIN
PYENLPIYGSDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTV
SAKYAMRYFATVSGAATEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKR
YRIIGANMRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKNLKLGSADDFHCTNQG
QNPIIDGVDDAKEMCTTRHAFSLLGINELNQRGLFQVLAAILHLGNVEIKDRDSDSSIIP
PNNRHLTVFCELMGVTYQDMSHWLCHKKLKTAQETYIKPIPRLQASNARDALAKHIYAKV
FNWIVDHVNKSLRATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK
LEQEEYLKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTH
LKTCSLFEKPRMSNKAFIIQHFADKVQYQCDGFLEKNKDTVNEEQINVLKASKLKLDLLV
ELFQDEEKATSPTGTAAGGRTRLSVKPKEIRPGASSKEHKKTVGCQFRNSLAMLMETLNA
TTPHYVRCIKPNDLKFPFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRV
LMKQKDVLSDRRLTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRKACVR
IQKTIRCWLVRKKYLRKKHAAITIQRYTRGHQARCLVKYMRQTLAAITIQKFQRMCVQRK
LYLQKQAAALVMQTILRAYMARQKYQGLLRNHKAVFIQKHVRGWLARQRYKRSLRAIVYL
QCCIRRMKAKKELKKLKIEARSVEHFKKLNVGMENKIMQLQRKLDEQAKDNRVTSERLNC
LETSHAVESEKLKVEVSKLKGIEEEAKNNANRVTSLLEELEKLRKELTTTQKEKKTIEDW
ATKYRDEMEKMVAELKEQNGLLKTEKDDLNRMIKEQSQQMTEKMARALAEETQQLESDLN
EERSRYQNLLTEHLRLEERYDDLKEEITLSVSVPKPGHRRTDSTHSSNGSECTYNSEFAE
SEESSRHGEDVTRGMDTSLTLKLQKRVTELEQEKSSLRNELENKEEQFQRARVRDDEEHR
KSRGAELEYESLKRQELDSENKKLKHDLTAMRQSLLGNAGAGAGAPGSPPYKVLMDQLNS
SCEELEVRKEEVLILRSQLVSQKEAMQHKDEKETMTEPVHYVEDVHKMKDSGAITQAYLG
LKETNRSPRFLRKPLEANELLNRLRSPTADFHRLNEDGELWLVYEGLKETNRLLEGQMQQ
QRRSYDNEVEVLRGELQSVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLEM
LLTEDPTAYRSAKVNILRRMVDLMEQLEKQDKTIRKLKKQLKVFSKKIGEMGAGQGETIS
PGQMVEETVRPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYI
LFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYS
GDESFMKHNTPKQNDHCLSNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEH
ETIQGVSGVKPTGLRKRTSSIADEGTYTLESILRQLSAFHSTMCQHGTDPELIKQVVKQQ
FYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKSLMLCGAKETLEPLIQAAQ
LLQVKKKTDEDAEAICSMCNSLSTSQIVKVLNLYTPVNEFEERVSVTFIRTIQTRLRDRC
ETPQLLMDTKIIYPVTFPFNPSSLALETIQIPGSLNLAFLTRV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggacacgacagctgcagtatggcagcgtcggagctgtacacaaagtttgct
cgggtgtggatccctgatgcagaggaggtgtggaagtcagcagagctcactaagaactac
aaacatggagattccacccttcacctcacactggaggatggaatggacattgagcacaag
ctggatgataagacgaagaaccttcctcacctccggaaccctgacatcctggtgggggag
aatgacctcacagctctcagctacctccacgagccggctgtcctgcacaaccttaaagtc
cgattcaccgactccaaactcatctacacatactgtgggattgtgctggtggccattaat
ccctatgagaatctgcccatctacggtagtgacatcatcaatgcgtacagcggccagaac
atgggagacatggaccctcacatctttgctgtggctgaggaggcttacaaacagatggcc
agagatgagaggaaccagtctataatcgtaagcggtgagtcgggagcagggaagactgtg
tcggctaaatacgccatgcggtacttcgctacggtcagcggagcagccacagaggccaac
gtagaggagaaggtcctcgcatccaaccccatcatggaggcgataggaaacgctaagacg
actcgtaacgacaacagcagtcgtttcgggaagtacatcgagatcggcttcgacaaacgc
taccgcatcatcggcgctaacatgaggacatatctactggagaagtctagagtggtgttc
caggcggacgaggagaggaactatcacatcttctatcagctgtgtgcgtcctcccatcta
ccagagttcaagaatctgaagctaggtagtgctgatgacttccactgcaccaaccagggt
cagaacccgatcatcgatggagtggacgacgctaaagagatgtgcacaacacgacatgcc
ttctcactgctaggcatcaacgagttgaaccagagggggctgttccaggtcctggcggcc
atcttacatctgggcaacgtggagatcaaggaccgagactctgatagcagcatcatacct
cccaataaccgccacctgacggtgttctgtgagctgatgggtgtgacctaccaggacatg
tctcattggctgtgccacaagaagctgaagacagcccaggagacctacatcaagcccatc
cctcggctgcaagcctccaatgcccgcgacgcgcttgccaaacacatctacgccaaagtc
ttcaactggatcgtggaccacgtcaacaaatctctgcgcgccactgtcaaacagcactcc
ttcataggagtcctggatatctatgggtttgagacgtttgagatcaacagttttgaacag
ttctgtatcaactatgctaacgagaagctacaacagcagtttaacatgcatgtgttcaag
ctggagcaggaggagtatttgaaggagcagattccctggactctgatagacttctatgat
aaccagccatgtatcaacctcatagaggccaagatgggagtactagatctgctggacgaa
gagtgcaaaatgcctaaaggttcagatgactcgtgggcccagaagctgtacaacacccat
ctgaagacctgctctctgtttgagaaacctcgcatgtccaacaaagccttcatcatacaa
cacttcgctgacaaggtgcagtaccagtgtgatggctttctggagaaaaacaaggacaca
gtgaatgaagagcagatcaatgtcctgaaggccagcaagctaaagttggacctgctagtg
gagctgtttcaggatgaggagaaggcgaccagtccgacagggaccgctgcaggaggtaga
acacgactcagcgtcaaaccaaaagagatcagacctggagcaagcagcaaggagcacaag
aagactgttggctgccagttccgtaactctctggctatgttgatggagactctgaatgcg
accactcctcactatgttcgctgcatcaagcccaatgacctcaagttccccttcacgttt
gaccctaagcgagcggtgcagcagctccgagcctgtggtgttctggaaaccatccgcatc
tcagccgcaggcttcccatccaggtggacctaccaggagttcttcagtcgttaccgggtt
ctgatgaagcagaaggacgtcctgtcggacaggaggctgacctgtaggaacgtcctggag
aaactagtgcaggaccaggataagtaccagtttggtaagactaagatcttcttcagggct
ggtcaggttgcctacctggagaagctgagggctgataagctgagaaaggcatgcgtccgc
atccagaagaccatccgctgctggctggtacgcaagaagtacctccgcaagaagcatgcc
gccatcaccatccagagatacacccgcggacaccaggcccgctgtctggttaagtacatg
cgtcagaccctggcagccatcaccatccagaagttccagaggatgtgtgtccagaggaag
ctgtacctccagaagcaggctgctgccctggtcatgcagactatcctcagagcatacatg
gcccgacagaaataccaagggttgctgcgtaaccacaaagctgtgttcatccagaaacac
gtgcgtggctggctggccagacagcggtacaagcgctccctgcgagccatcgtctatctg
cagtgctgcatcaggaggatgaaggccaagaaagagctaaagaagctgaaaatcgaggcc
cgctccgttgaacacttcaagaagcttaacgtcggcatggagaacaagatcatgcagctg
cagaggaagttagacgaacaggctaaagacaaccgtgtgactagcgagcggctgaactgt
ctggagacgtcccacgcggtggagagtgagaagctgaaggtggaggtgtctaagctgaag
gggatagaagaggaagccaagaacaacgccaaccgtgtcacttcccttctggaggagctg
gagaagctgaggaaggagctgaccaccacccagaaagagaagaagaccatagaggactgg
gctaccaagtacagggatgagatggaaaagatggtagcagagctgaaggagcagaatggt
ctgctgaagaccgagaaagacgacctgaaccgaatgatcaaagaacagagccagcagatg
acagagaaaatggctcgtgcattagcggaggagactcagcagttggagagcgatctgaac
gaggagaggtctcgctaccagaacctcctaacagaacacctgagactggaggaacgctac
gacgacctcaaggaagaaatcacactctctgtgagtgtgcccaagcccggccacaggaga
acagactccacccacagcagcaacggatcagagtgcacctacaactccgagttcgccgaa
tcagaagaaagctcccgacatggagaagatgtgacccggggcatggacacgtctctgact
ctgaagctgcagaagcgcgtgacggagctggagcaggagaaatcctctctccgcaacgag
ctcgagaacaaggaggagcagttccagcgggctagagtcagggatgatgaggagcatagg
aaatctcgtggagcagaactggagtacgagtcgctcaagcgccaggagctggattcggag
aacaagaagctgaagcacgacttgaccgccatgaggcagagcctgctgggtaatgcaggc
gctggggcaggtgcaccaggaagtccaccttacaaagttctcatggaccaactgaactct
tcctgcgaggagctggaggtgcggaaagaggaggtgctgattctacgatcccaactggtc
tctcagaaggaggccatgcagcacaaggatgagaaggagacaatgacagagccagtgcac
tatgtagaggatgtccataagatgaaggactctggtgcaatcactcaggcttatctagga
ctcaaagagaccaacagatctcccaggttcttgcgtaaaccactagaagccaatgagctc
cttaatcggctcagatctcccactgctgacttccataggctgaatgaggacggagagctg
tggctggtatatgaagggttaaaagagaccaacagactgttggagggccagatgcagcag
cagcggcgtagctatgacaacgaggtggaggtgttgcgaggggagttacagagtgttaaa
gaggagaataaccgtcaacaacagctgctggcccagaacctgcagcttccaccagaggca
cgcatagaggctagtctacagcatgagatcacacgactcaccaacgaaaacctggagatg
ctgctgactgaggatccaacagcatatcgcagcgccaaagtcaacatattacgacggatg
gttgacctcatggaacagctggagaagcaggataagactatccgtaagcttaagaaacag
ctgaaggtgttctctaagaagattggagaaatgggagctggccagggtgagactatatct
ccgggtcagatggttgaagagacggtccgtccagtgaacattcctcgtcgggagaaagac
ttccagggaatgttggagtacaagaaggaggatgagctgaaactggttaagaacctcata
ctggagttgaagcctcgtggtgtagcggtgaatctgatcccagggctcccagcgtacatc
ctcttcatgtgtctgagacatgctgactatgtcaacgatgaccagaaggtcaggaccctg
ctcacatctaccatcaacagcatcaagaagatactcaagaaacggggggatgactttgag
acagtctccttctggctgtccaacacctgccgcttcctacactgtctcaaacagtacagc
ggagatgagtcgtttatgaagcacaacactcctaagcagaatgatcactgcctgtctaac
tttgacctggctgagtaccgtcaggtcctcagtgacctggccattcagatctaccagcag
ctcatcaaatgcatggagaacatcctacagcccatgatcgtctctggtatgttggagcat
gagaccatccagggtgtgtcgggggttaagccgaccggtctgcgtaaacggacatcgagc
atcgctgacgagggaacctacacactggaatccatcttacgccagctcagcgctttccac
tccaccatgtgtcagcacggcaccgaccctgaactcatcaaacaggttgtgaagcagcag
ttctacatcattggagctgtgactctcaacaatctgctactgcgtaaagacatgtgctcc
tggagcaagggcatgcagatcaggtataacgtgagtcagctggaggagtggctgcgtgac
aagtctctgatgctgtgtggagccaaggagactctggagcctctgattcaggctgctcag
cttctgcaagtcaagaagaagacggacgaagacgccgaggccatctgctccatgtgcaac
agcctctccacatctcagattgtgaaggtgttgaacctgtacactccagtcaacgagttt
gaagagagggtgtctgttaccttcatacgaaccatacagactcgtttgcgggaccggtgt
gagactcctcagctgttgatggacactaagatcatctaccccgtcaccttccctttcaac
ccctcctctttggccctggagactatccaaataccaggctccctcaacctagccttcctt
acccgcgtctaa
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integrated database retrieval system
