Coregonus clupeaformis (lake whitefish): 121579948
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Entry
121579948 CDS
T08357
Name
(RefSeq) teneurin-1
KO
K24473
teneurin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121579948
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
121579948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
Ten_N
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
EGF_2
RHS_repeat
NHL
EGF_Tenascin
I-EGF_1
CarboxypepD_reg
DUF4595
Motif
Other DBs
NCBI-GeneID:
121579948
NCBI-ProteinID:
XP_041750893
LinkDB
All DBs
Position
13:56228112..56446523
Genome browser
AA seq
2703 aa
AA seq
DB search
MEQMDCKPYQSLSKARNEMELAYTSSSDESEDGRNLCKSYTSRETLPDYGQEMRLNYNSH
RAKRKTVEEPTGDLDQLARPSYQAELRSAPQHGYPLGMGSDVETETEGGPSPDHALRLWM
QEIKSEHSSCLSSRANSVLSLTDTEQERKSDGENELPSSPPAQFTFRPLPPPPPPPHACT
CARPAPHAHVSEALQRNTLPARSQAMDGDPTQPADRDRGQLHNSWALNSNIPLETRHFLF
KHGSGSSALFSAASQNYPLTSNTVYSPPPRPLPRSTFSRPMFTFNKPYKCCNWKCTALSA
TAITVTLALLLTYVIAVHLFGLTWHLQPADGEFYENGLSKLDRDSESIDITFTPFGLPGL
NNTNKDKELFQRGKAIDRGEVDIGTQVMQVIPPGLFWRFHITIHHPEYVKFNVSLARDAL
LGIYGRRNIPPTHTQFDFVKLLDGKQLIRQEVQMVAEDSNASPRNLILSSLQETGFIEYM
DAGTWYLAFYNDGKKMEQVFVLSTAIETMDGCSTNCKGNGECVAGHCHCFTGFLGPDCSK
DSCPVLCSGNGDYEKGYCQCHPGWKGPECDIQEDQCIDPTCSNHGTCVNGICMCSPAYKG
NNCEQVDCLEPQCSGHGVCVKGECLCSTGWGGPDCESPLPACQEQCSGHGKYLPDSGTCT
CDSSWTGSDCSTEVCPVPCSAHSVCVGGKCQCEEGWEGPGCDLQACHPRCKEHGQCKNGQ
CECHPGWEGEHCSIDGCPGLCNGHGRCTLEQSGWHCVCQASWSGMGCNVVMETECDDNAD
NDGDGLTDCVDPDCCQQPSCHSGPLCQGSPDPLDLIQQSQTPYASLLSRLFYDRVRFLIG
KDSTHVFPGDIPFDSSRASVIRGQVVALDGTPLVGVNISFQQYPAFGFSVSRQDGSFDLV
AAGGISVSLIFQRAPFLMQKRTVWLPWNQFVVVEKVTMARVESRPPVCDLKNLVSPYPIV
LPSPLIRFASTCEERGPAIPELQAVQEEITIPGSFLKLSYLSTRSPGYKSLFRIILTHSI
IPTGLAKVHVSTAIEGRLFQKWFPAAPNLVYVLAWNKTDVYGQKVVGLAQALVSVGYEYE
SCADYIVWERRMAQLQGFEMIASNLGGWSLDKHHILNLQSGVLHKGNGENIFISQQPPVI
YTVMGTGYLRTIPCPNCNGPALGSKLYAPVAITCGSDGSIYVGDFNFIRRILPNGFVISI
LELRNRDIRHSSSPAHKYYLAMDPVREALYLSDTSSRRVYRLRTLTEPKDLAKNMEVVAG
TGDQCTPFDQGHCGDGGKAIDASLNNPRGIAVDKQGFVYFVDGTMIRKINGKGMISTVIG
SNGLMSTQPLSCDARMDISQVRLEWPTYLAVNPMDNSLYILDNNIVIQVSESSQVRIVAG
RPIHCQVPGIDHYLVSKAAVHSTLEAAKAIAVSHQGTLYIAETDERKINRIQQVTTNGEI
SVVAGAPTECDCKIDPNCDCFSGDGGYARDAKLKAPSSLAVSPNGTLYISDLGNIRIRAL
SPNRPQLNQNSMYEITSVVDQELYLFSVNGTHLHTRSLVTGDYIYNFTYSGEGDVSAVVS
SDDTAVHVRRDANGVPLWLLVPGGQVYWLTISNGGVLKKVSALAHDLAQISYHGNSGLLA
TMSNEIAWTTVYEYNSDGHLINVTLPTGEVSSFHGNMEKSVRVEADTSNREKFITATNFS
AASTIYTLRQEHAQNTYRVSSDGSLWVTFASGMEVTLNTEPHISAGVVNPTVGKCNITLP
GEHAHSVIEWRQRRDQAKGNYTAYERRLRAHNRNVLSIDFNQATRVGKIYDDHRKFTLRI
LYDQMGRPIVWSPSSKYNEVNVTYSPAGLVTSIQRGNWSEKLEYENGRVVSRTWTNGKIW
SYTFLEKSVMLLLHSQRRYTFEYDHTDYLMSVTMPSMVRHSLQSMLSVGYYRNTYSPPDS
SGASVIQDYSHDGRLLQTLYLGTGRRILYRYTHQSRLAEILYDTTLVTYTYEEASGGVKT
IHLMNQGFMCTIRYRQTGPLVGRQIYRFSVEGLVNARFDYSYNNFRVTSMQAMINETPLP
IDLYRYVDVSGRIEQFGKFSVINYDLNQVITTHIMKHTKIFNANGQVIEVQYEILKSIAY
WMTVQYDNMGRITICDIRIGVDNNITRYSYEYDADSQLQAVSVNDRPQWRYSYDLNGNIN
LLSHGNSARLTPLRYDLRDRITRLGEIQYKMDEDGFLRLRGNVMFDYNSNGLLAKAFDKV
SERSVHYRYDGLGRRVASRTSDGQQLQFFYADLTKPTRVTHMYNHSSSEITSLYYDLQGH
LIAMELSSGEEYYVACDNSGTPLAIFSSQGHIVKEMLYTPYGDIYQDSNPSFQLIIGFQG
GLNDALTKLVHLGRRDYDVVAGRWTTPNHNLWTELSINPKPFNLYSFKNNYPVAELQDVT
KFTTDISSWLQLFGFQLHNVVPGYPKPEVESMEQTYEMMKTQTKTQDWDPSKVLLGIQCE
LQKHLKNFISLDRLPMSKVSGQLGAWHGRRPRFSAISSIFGKGVKFAIRDNVVTTEIIGV
ASEDSRRVAAVLNHALYLSGLHFTVDGLDTHYFVKPGLLEGDLGVVGHTGAGRVLENGVN
VTVSQMTTVVDGRTRRFADIQMQHGTLCFNIRYGATEEEEREHVLEVARQRAVEQAWVIE
QRRLEEGEEGSRLWTEGERQQLLSTGHVPGYDGYFVLPVEQYLELSDSANNIHFMRQSEI
GRR
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggattgtaagccttaccagtcgttgtccaaggcccggaatgagatggag
ctcgcctacaccagctcttcagacgaaagcgaggacggcaggaacctttgcaaatcctac
acatcccgagagaccctgcccgactacggccaggagatgagactcaactacaacagccac
agagccaagcggaaaacagtggaggagcccactggagacctggaccagctagcacggccc
agttaccaggcggagctgcgctctgccccccagcacggctatccgctgggcatgggctct
gatgtggagacagagacggagggtgggccctcgcccgaccatgccctcagactgtggatg
caggagatcaaatcagagcacagctcctgtctgtccagcagagccaactctgtcctgtcg
ctcaccgacactgagcaggagaggaagtcagacggagagaacgagctccccagcagtcca
ccagctcagttcaccttcagacccctacccccacctccaccccctccccacgcgtgcaca
tgtgcccgcccagcccctcacgctcacgtttctgaggcactgcagagaaacaccctgccg
gctcggagccaggcgatggacggagatcccactcagccggccgacagagacagaggccag
ctccacaacagctgggccctcaacagcaacatccccctggagaccagacatttcctgttc
aaacatggctcaggctcctctgccctgttcagcgctgccagtcagaactaccctctgaca
tctaacacagtgtactccccacccccacggcccctacccaggagcaccttctccagacct
atgttcaccttcaacaagccctacaagtgctgcaactggaaatgcactgccttaagcgcc
accgctatcaccgtaaccctcgcccttttgctcacatacgtcattgcagtacacttgttt
gggctgacctggcacctgcagccagcggatggggagttctatgagaatggactcagcaaa
ctggacagagactcagagagcatagacattaccttcacgcccttcggtctgcccggcctc
aacaacaccaacaaagataaggagctattccagagggggaaagcgatagaccgaggggag
gtggacattggtacccaggtgatgcaggtcattcccccaggtctgttctggcgtttccac
atcaccatccaccacccagagtatgtcaagttcaatgtctccctggcacgggacgccctc
ttggggatctatgggcggaggaacatcccccctacacacacacagtttgactttgtcaag
ctcctggacgggaagcagctgatcagacaggaggttcagatggtagcggaggattccaac
gcgtcgcccaggaacctgatcctatcctccctccaggagacaggcttcatagagtacatg
gacgctggaacctggtacctggctttctacaacgacggaaagaaaatggaacaagttttt
gttctgagcactgccatcgaaaccatggacggctgctccaccaactgtaaggggaacggg
gaatgtgtagcaggtcactgccactgcttcactggctttctgggaccagactgctcaaaa
gactcgtgtcctgtcctgtgcagtgggaatggagattatgagaaaggttactgccagtgt
cacccgggctggaagggcccagagtgtgacatccaggaggaccagtgcatcgatcccacc
tgctccaaccacggcacctgtgtcaacggcatctgcatgtgcagcccagcctacaagggc
aacaactgtgaacaagtggactgcctggagcctcagtgttctggccatggtgtgtgtgtg
aagggggagtgcttgtgttcaacggggtggggcggcccagactgcgagagccccctgcca
gcatgccaggagcagtgttcaggccatgggaaatacctgccagactctggcacctgtacc
tgtgattccagctggactggctccgactgctccaccgaggtgtgtccggtgccctgcagt
gcccacagtgtgtgtgtgggagggaagtgccagtgtgaggagggctgggaggggccaggc
tgtgacctgcaggcctgccacccccgctgcaaggagcatggccagtgtaagaacggacag
tgtgagtgccaccccggctgggagggagaacactgcagcatcgacggctgtccaggcctg
tgcaatggccacggtcgctgcaccctggaacagagcgggtggcactgtgtgtgccaggcg
agctggagcggcatgggatgcaacgtcgtcatggagaccgagtgtgatgacaacgccgac
aacgacggagatggcctgacggactgtgtggacccggactgctgccagcagcctagctgt
cacagtgggcctctgtgccagggctccccggaccccctggacctaattcagcagagccag
accccctacgcctcgctcctctcacgcctcttctacgaccgcgtacgcttcctgattgga
aaggacagcacccatgtcttccctggagacatcccattcgacagcagccgagcctcagtg
atccgggggcaggtggtggcactagatgggaccccactggtgggggtgaacatcagcttc
cagcagtaccctgcatttggcttctctgtcagtcgccaggatggcagttttgacctggtg
gctgcagggggcatctcagtctccctgattttccagagggctcccttcctcatgcagaaa
cgcaccgtctggttaccatggaaccagtttgtggttgtagagaaggtcaccatggcgagg
gtggagtctcgcccccctgtgtgtgacctgaagaacctggtcagtccgtaccccatcgtc
ctcccctcccctctcatccgcttcgccagcacctgtgaggagcgaggcccagccatccct
gagctgcaggctgtccaagaggagatcaccatccctggcagtttcttaaagctcagctac
ctgagcactcgctcccctggctacaagtctctgttccgcatcatcttaacccactccatc
atccccactggcctggctaaggtgcacgtgtccaccgccatcgagggacgactctttcag
aagtggttccctgccgcccccaacctggtctacgtcctggcctggaacaagactgatgtc
tatgggcagaaagtggtgggcctggcccaagctctggtctctgtaggctatgagtatgag
tcatgtgctgactacattgtgtgggagagaaggatggctcagctgcagggctttgagatg
attgcctccaacctggggggctggtccctggacaagcaccacatccttaacctccaaagc
ggtgttctacacaaagggaatggagagaacatcttcatctcccagcaaccgccagtcatc
tacacagtgatgggtacgggctacttgcgcactatcccctgccccaactgtaacggccct
gccctgggtagcaagctctacgctcctgtcgctatcacctgtggctccgacggcagcatc
tacgttggcgacttcaacttcatcagaaggattctgcccaatggatttgtcatcagcatt
ttagaattgaggaatcgagatatcaggcacagctccagcccagcccataagtactacttg
gccatggacccagtaagggaggccctctacttgtccgacactagcagcaggagggtctac
agactcaggaccctcacagagcccaaggacctggccaagaacatggaggtggtggcaggg
acgggggaccagtgcacccctttcgaccagggccactgtggagacgggggcaaagccatc
gatgcctccctcaacaaccccagagggattgcagtggacaagcaaggattcgtctacttt
gttgatggaaccatgattcgcaagatcaatgggaaaggaatgatatcaactgtcattggt
tccaacggcttgatgtccactcagccgttaagctgtgacgcccgcatggatatttcacag
gttcgtctagaatggcccacctacctggctgtcaaccccatggacaactccctgtacatt
ctggacaacaacatagtgatccaggtgtcagagagtagccaggtgaggatcgtggcgggc
cggcccatccactgccaggtccctgggatcgaccactacctggtcagcaaggcagccgtc
cactccaccctggaggcagccaaggccatcgcagtttcccaccagggcacactctacatc
gccgagacggacgagaggaagatcaaccgcatccagcaggtcaccacgaacggggagatt
tctgtggtggccggggcacccacagagtgtgactgcaagatcgaccccaactgtgactgc
ttctccggcgatggtggatatgcccgtgatgccaaactgaaggctccgtcctccctggct
gtttcccctaacgggactctgtacatctctgacctggggaacatccgtatcagggccctg
tcccccaacaggccccagctcaaccagaacagcatgtatgagatcacctctgtggtggac
caggagctctatctgttcagtgtcaacggcacccacctccacacccgcagcctggtcacc
ggggactacatctataacttcacctactcaggagagggagatgtgagtgccgtggtctcc
agcgacgacaccgcggtccacgtgcgccgtgatgccaacggcgtgcccctctggctgctg
gtgcccgggggtcaggtatattggctcactatcagcaacgggggcgtcctaaagaaagtc
tccgccctggcgcatgacctagcgcagatcagctaccatggcaactcaggtctcctggca
accatgagcaatgagattgcctggacaacggtctatgagtataattctgatggtcatctc
atcaatgtcaccttgccaacgggagaggtcagcagtttccacggcaatatggagaaatca
gtgcgggtggaagcagacacttctaatcgggagaaattcatcacagccacaaacttctct
gctgccagcactatctatacattacgccaagagcatgctcaaaacacataccgtgtgagt
tcggacggctctctgtgggtgacgttcgccagcggcatggaggtgaccctgaacacggaa
ccccacatctcggcgggcgtggtcaaccccacagtgggcaagtgtaacatcaccctgccg
ggcgagcatgctcacagcgtcatcgagtggagacagagaagagaccaggctaaagggaac
tacacggcctacgaacgcaggctcagggctcacaacagaaatgtgctgtccatagacttt
aaccaagccacacgagtaggcaagatctatgacgaccaccgcaagttcaccctgcgtatc
ctctatgaccagatgggtcgtcccatcgtttggtctcccagcagcaagtacaatgaggtg
aatgtgacctactctccagcgggcctggtgaccagcatccagaggggcaactggtcagag
aaactggagtatgagaatgggagggtggtctccaggacatggaccaatgggaagatatgg
agctacactttcctggagaagtcggtcatgctgctgttgcacagccagcggcggtacacc
tttgagtatgaccacacagactacctgatgtctgtgaccatgcctagtatggtgcgtcac
agcctgcagtccatgctgtcagtgggttactacaggaacacctacagccctccagacagc
agcggagcctctgtgatccaggactacagccatgatggccgcctgctccagactttgtac
ctgggcacgggccgccgtatcctctaccgctacacccaccagtcccgcctggcagagatc
ctgtacgacaccaccctggtcacctacacctacgaagaggcctccgggggggtgaagacc
atccacctcatgaaccagggcttcatgtgcaccatccgctacagacagacaggtcctctg
gttgggagacagatctacaggtttagtgtggagggcctggtgaatgccagatttgactac
agctataataacttccgggtcaccagtatgcaggccatgatcaatgaaacccctcttccc
attgacctttaccgttatgttgatgtatcgggaaggattgaacagtttgggaaattcagt
gtcataaactatgacctcaatcaagtgatcactacacacatcatgaagcacactaagata
tttaatgccaacggacaagtgatcgaggtccagtacgagatcctgaagtctattgcctac
tggatgacagtgcagtatgacaacatgggccgcatcactatctgtgacatcaggattggt
gtggataacaacatcacacgctactcatacgagtatgatgctgatagtcagctccaggct
gtgtcggtgaatgataggccacagtggcgctatagttacgacctcaacggcaacattaat
ttactgagtcatggcaacagtgccagactaacgccgctacgctacgacttacgagaccgc
ataacaagactcggagaaattcaatacaaaatggatgaagatggctttcttcgcctgcgg
ggcaatgtcatgtttgattacaactccaatgggctgcttgccaaagcatttgacaaagtg
tcagagaggagtgttcactaccgctatgatggcctgggcaggcgggtggccagcaggacc
agtgacggccagcagctgcagttcttctatgctgacctgaccaaacccaccagggtgacc
cacatgtacaaccactccagctctgagatcacctcgctctactacgacctgcagggacac
ctgattgccatggagctgagcagtggggaggagtactacgtagcctgtgataactctggc
acgccactggccatcttcagcagccaaggacacatagtcaaggagatgctctacacccct
tacggagacatctaccaagactcaaacccctcctttcagctgatcatcgggttccagggc
ggtctcaatgacgcgctgaccaagctggtccacctggggagaagggactatgatgttgtg
gctgggaggtggaccactcccaaccataacctgtggacggagctcagcatcaaccccaag
cctttcaacctctactccttcaaaaacaactaccctgttgcagagttacaggatgtcacc
aagttcactacagacatcagcagttggttgcaactgtttgggttccagctccacaacgtt
gtccctggttaccccaagccggaggtggagagcatggagcaaacctacgaaatgatgaag
actcaaaccaagacacaagactgggaccctagcaaggttctgttgggtatccagtgtgag
ctgcagaaacacctaaagaacttcatctctctggaccggctgcctatgagtaaggtgagt
ggtcagctgggagcgtggcatggccggaggccccgcttctctgccatctcctccatcttt
ggtaagggtgtcaagttcgccatcagagataatgttgtcaccaccgaaatcattggtgtt
gcaagcgaggacagccggcgtgtggcagcagtcctaaaccacgcgctctacctctccggc
ctgcacttcactgtggacggtctggacactcactacttcgtcaagcccggcctgctggag
ggggacctgggagtggttggccacaccggagcgggtcgcgtcctggagaacggcgtcaac
gtgaccgtgtcccagatgacgacggtggtggatgggaggactaggcgcttcgctgacatc
cagatgcagcatgggactctgtgtttcaacatccgctacggggccacagaggaggaggag
agggagcatgtgctggaggtggcccggcagagggcggtggagcaggcctgggtcatcgag
cagaggaggctggaggaaggagaggagggctcgaggctctggacagagggggagaggcag
cagctgctctccactggacatgttcccggctacgacggctacttcgtcctccccgtggag
cagtacctggagctctcggacagtgccaacaacattcacttcatgaggcaaagtgaaata
gggaggaggtaa
DBGET
integrated database retrieval system