Coregonus clupeaformis (lake whitefish): 121579954
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Entry
121579954 CDS
T08357
Symbol
chmp1b
Name
(RefSeq) charged multivesicular body protein 1b
KO
K12197
charged multivesicular body protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04144
Endocytosis
cclu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121579954 (chmp1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121579954 (chmp1b)
09143 Cell growth and death
04217 Necroptosis
121579954 (chmp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579954 (chmp1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121579954 (chmp1b)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
121579954 (chmp1b)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121579954 (chmp1b)
Exosomal proteins of other body fluids (saliva and urine)
121579954 (chmp1b)
Exosomal proteins of colorectal cancer cells
121579954 (chmp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
DUF948
Mt_ATP-synt_D
hGDE_central
Peptidase_C10
DUF5798
Motif
Other DBs
NCBI-GeneID:
121579954
NCBI-ProteinID:
XP_041750903
LinkDB
All DBs
Position
13:56621210..56624410
Genome browser
AA seq
199 aa
AA seq
DB search
MSNMEKHLFNLKFAAKELQRSSKKCDKEEKAEKAKVKKAIQKGNVEVARIHAENAIRQKN
QSVNFLRMSARIDAVAARVQTAVTMNKVTKSMAGVVKGMDATLKSMNLEKISGLMDKFEH
QFETLDVQTAQMEDTMSSTTTLTTPQNQVDSLMHELADEAGLDLNMELPQGQTGSVGTSV
ASAEQDELSSRLAKLRDQM
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatatggagaagcatctcttcaatctcaagtttgcagccaaagaactgcaacga
agctctaaaaaatgtgacaaagaggaaaaggcagagaaggccaaagtcaaaaaagctatc
caaaaaggaaatgtggaagtggcacggatccatgcggaaaacgccatcagacagaagaac
cagtcggtcaacttccttaggatgagtgctaggattgatgcagtggccgccagggtccaa
acagcagtcacaatgaacaaggtcacaaaatctatggctggagtggtgaaaggcatggat
gccacattgaagagtatgaacctggagaagatctccggccttatggacaagtttgagcat
caatttgagacgttggatgtacagaccgctcaaatggaggacaccatgagtagcacaacc
acactaaccaccccacagaatcaagtggattcactgatgcacgaattggctgatgaagca
gggttggacctgaacatggagctcccacagggtcagactggatcagtgggcaccagtgtt
gcgtcagcagagcaggatgaactgtcttcaaggcttgccaaactccgagaccaaatgtaa
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