Coregonus clupeaformis (lake whitefish): 121579963
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Entry
121579963 CDS
T08357
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121579963
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121579963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121579963
04090 CD molecules [BR:
cclu04090
]
121579963
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121579963
CD molecules [BR:
cclu04090
]
Proteins
121579963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
TMEM70
DUF6022
TM_ErbB1
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
121579963
NCBI-ProteinID:
XP_041750920
LinkDB
All DBs
Position
13:complement(57046059..57107257)
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AA seq
566 aa
AA seq
DB search
MEDGSTFKMFLPCLRNYPLYKGQNAVFIVLLYIFTGVGGSQVLVPQKVSAVLGKNVTLGC
SVDVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISISPDYVRRLSFRSPSSHDATIILE
DVGFADIGVYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVTLQDEANGTTSTQVRYLWQPTRHVQGHALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGRENIQLTCKAKSNPPAHHFKWIRLDGNMPEGV
EMVNNTLLFLRPLQRNDSGVYRCEVANDINLRSRDLRIRIQDPPTTSMPSTTPVPVLTGS
ASSSVGDKRRVLFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFR
GDYYTKQYVGPSDMQKAPPQHELHPTKPANNVYLDKDREEWGDRERLHLHPTSTTIMNNH
NHREPECQPNGLTRAMRNGDHNHHDHDHLRSYPSPHQIGHARYAAKSHPLSTCSPYLSDD
CYDSGAEGDYVSHTDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctcaggaattaccccctttac
aaaggacagaacgctgtatttattgttcttctgtacatctttacaggtgtggggggcagt
caggtgttggtgccccagaaggtgagtgctgtgttggggaagaatgtgacgttgggctgt
agcgtggatgtgggggccaacctcagtcttacccagagttcctgggagcgacggctcccc
acaggctcggtgacggtggcggtgtacaaccccgtgttcggcatctccatctccccagac
tacgtacgccgcctgtccttccgctcgccctcctcccatgacgccaccatcatactggag
gatgtgggctttgcggacattggagtatatacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccaaggtgtatgtgtcggct
ggctcggtggctctgatcgacgagggcaatgaaacggtggtggccacctgcatcgctgag
cgggcccggccccccgccgaggtctcctgggagacggacctgtttggccaatcagaggtg
acgctgcaggacgaggcaaacggcaccaccagcacccaggtgcgctacctgtggcagccc
acccgccatgtccagggtcacgccctcacctgtgtggtgcgccaccctgccttgcacaca
gacttcaggatcccctatcagctcaacgtgcagtacgccccagacatcgtggtggtaggt
tatgatggtgactggtacgtgggccgtgagaacatccaactgacctgcaaagccaaatca
aacccaccagcacaccacttcaaatggatcagactggacgggaacatgccagagggggtg
gagatggtgaataacacgttgctgtttctgaggcccctccaacggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgcggatacgcata
caagatcctcccaccacatccatgccctccaccacccctgtgcctgtcctaaccggctct
gcttcctcctctgtgggagacaagcgacgggtcctcttcacctcccccaccctggcagcc
ctgccccccgacaaccacctgggcaccatcgtgggcggggctgtgggcggagccttgttc
ctccttctgttgctggtgctgggcggggtctgttacctacggcaacggcagaccttccgt
ggggactactacactaagcagtacgtagggccttcagacatgcagaaggctcctccacag
catgagctccaccccaccaagcctgccaataacgtctacctagacaaggaccgcgaagag
tggggcgaccgcgaacgcctccacctgcatccaacatcaacaaccatcatgaacaaccac
aaccacagagaaccggagtgccagcccaacggcctcacgagggcgatgaggaacggagac
cacaatcaccatgaccacgaccacctgcgtagctaccccagcccccaccagataggccat
gccagatacgctgccaagtcacacccactgagcacctgctccccctacctgtcggatgac
tgctatgacagcggggccgagggggactatgtctcccatacggatggctcagtgatctca
cgcagggagtggtacgtctga
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