Coregonus clupeaformis (lake whitefish): 121579981
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Entry
121579981 CDS
T08357
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121579981
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Other
121579981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
Sp38
DUF6034
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
121579981
NCBI-ProteinID:
XP_041750956
LinkDB
All DBs
Position
13:57599153..57690240
Genome browser
AA seq
2077 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRLTYSSSVGVSLPCPAGGTPTAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIIPANRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPSILDSFQAGEVRAG
QSVELPCMAAGYPNPTVRWLKDGRPLPSDARWMRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTDPIVPDQH
ISIQGPHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVA
PGEPFSLMCGAKGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSSPAIRDG
GVYRCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFK
DGMLLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSTSGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPP
PKVMWKHAKGIGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMVLTVKIPAMITSHPNTTMAIKGQVKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVY
SIRMYSFNKIGRSQPSKELTISTEEAQPDGPPMDVILQPMTSQSIRVTWRAPRKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAQGSMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPQAWVEAEIG
REREREKKAPSEYEANPEMLFYRITHLTRGKQYLIWAAAVTTAGRGNISEKVTVEPAGKA
PAKILSFGGTVTTPWMKEIRLPCSSVGEPTPTFKWTKDSEDSTIPVTVDGQRQILSNGTL
VLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDN
GGSSIRGFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISE
IIEAKTHGREPVFNKEQPLLTHINSTHAGLNLQGWTSGGCPITALLLDFRPKGTWAWQSL
KANATAQLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPINSAQEDRDD
VKKLFSIGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSMDTPVK
GPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKAAAPVTDTEFSQSVNPQSFCTGVSLHHP
ALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSSRNRYSSQWTLSRPGQSQSTASARTLTS
DWRTMGSHGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQ
HAKFTITECFISDSSSDQMTTGTNDPADSMTSLSTPSETGLCRFTASPPKPQDYDRGRPT
NVAVPIPHRANKSEFCNLPLYMKTDPFFRKQAELHDPCPAVPPREASIRSLAQRSYHTQG
RHMTLDPSKQQALTLGHSGLGSLGMSSGTATLPQRTLTMPGSNPAATASTSSTSSNPTGS
STKMGGSRDSLLENSSSALGRLQKQGVGAYSKSYTLV
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccaggaagtacacagcgaggatgtg
ggctctaccaggctgtactttgtgaacgcgtccctccagaggctgacctactccagctcg
gtgggggtgtctctgccctgtccggcgggcggcacccccaccgccatcctgcgctggtac
ctggccaccggcgatgacatctacgatgtgccccacatccgccacgtccatgccaatggc
accctccagctgtaccccttctcgccctccgccttcaactcctacatccacgacaacgac
tacttctgcaccgcagagaaccaggctggcaagatccgcagccccaacatcagagtcaaa
gctgtgttcagggagccctacacggtgcgtgtggcagaccagcgctccatgcgtggcaac
gtggccgtgttcaagtgcctcattcccaccgccgtgcaggagtacgtcagcgtggtgtcc
tgggagagagacaccgtctccatcatcccagctaacaggttcttcctgacgtcctttggt
gctctgtacatctcagatgtccagaaagaggatgccctctctacctaccgctgtatcacc
aagcacaaatacagcggagagacacgccagagcaatggagccaggctgtctgtcatggac
cccacagagtcgtctccctctatcctggatagtttccaggcgggggaggtgcgggcgggt
cagagtgtggagctcccctgcatggcagcggggtaccccaaccccacagtgcgctggctg
aaggacggccgcccactgccttccgacgctcgctggatgcggcgcctcacaggtctgacc
atcagtgacctcaggcaggaggacagcggcagctacgcctgtgaggtcaccaacagcttt
ggctccaaggaggtgtccggagcactttacgtcatagaccccctgcgagtgaccctttcc
cccaagagtctgaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggt
tctccagagtacacagtggcctggtacaggaacacagaccctatagtcccagatcagcac
atctccatccaggggccccacaacgacaccctgcagatcacagcggctcagaagagccac
tctggggcctaccagtgcttcgcctcccgcaagggccacaccgcccaggacttctctatc
atactgctggaggatggtactcctcgtatcgtgtcctccttcagtgagcgcgtggtcgcc
cccggtgagcccttctccctgatgtgtggcgccaaaggagccccacccccctccatcacc
tggacgctggacgacgagcctgtggtgcgagactccgcctacaagaccagccagtacacc
ctatcagacggcctgaccgtgtcacatgtcaacgtaagcagcccggccatccgcgatggg
ggagtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggttctcctaggatcagggagatgcgtgacatcacggctgtagctggaagg
aacacctttataacctgtcgtgtgattggttacccctactactctatcaagtggtttaag
gatggcatgctgctgcctgacaaccatcgccaggtggtgtatgagaatggaaccctgagg
ctgagtgatgtgcagaagggcatggacgagggtacctacctgtgtagtgtactcatccag
ccacagacctccatcgaccagactgtccatgtcactgtgaaagtgccgcccctgatccag
ccctttgacatcccctccacgtcggtgggaaagctgatgtacatcgcctgcgtggtgtcg
tcaggggacatgcccatccgcatcacctggcacaaagatgggcagctcatcgtgcctggc
tccacctccggcgttggcatagagaccaaggagttcatgagctccctgcagatttccaag
gtgacactgaagcacaacggcaactacacctgcatcgctagcaacgccgcggcaactgtc
agctgggagagacagctgatcgtcaccgttccccctcgcttcgtggtccagcctaacaac
caggatgggatctatgggaaggcaggagtactcaactgctctgtggaggggtaccctcct
cccaaagtcatgtggaaacacgccaaaggtatagggaacccccagcagtaccaccctgtg
cctctgactggtcggatccagatcatgtccaacggctccctgctgatccgtcacgtcctg
gaggacgaccggggatactacctctgtcaggcctccaacggagtgggttctgacatcagc
aagagcatggtccttaccgtcaagattccagccatgatcacgtcgcaccccaacaccacc
atggccatcaagggccaggtgaaggagctgaactgcacagcgcggggggagcagcccatc
atcatccgctgggagaggggtgacaccgtcattgacgccgagagaaaccctcgctactcc
atcaccatcaacaagaaaggggacgaggtcatctccacgctcaagctgaagccagcggag
cgcggggactcagtcttcttctcctgccacgccatcaactcatacggagaggggcgagga
ctcatccagcttaccgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtg
aaggaccgcagtatgaacctgcgctggatccagaggttcgatggcaacagcatcatcacc
agctacgacatcgagtataagaacaagtctgatacttgggatcacaagtacacaaccagg
aacatctcccccactaacaaccaggctaacatcgtggagctgcaccctgcctgtgtctac
agcatccgcatgtactccttcaacaagatcggacgcagccagcctagcaaggagctcacc
atcagcacagaggaagcacaacctgatgggccccctatggacgtgatcctccagccaatg
acgtcgcagagcatacgggtcacatggagggcccccaggaaggagcttcagaacggggtg
atccgggggtaccagattggttaccgtgaaaatgggccgggcagtaatggccagtacagc
attgtagagatgaaagctacaggggacagcgaggtgtacaccctggacaacctgaagaag
tttgcccagtatggagtggtggtccaggccttcaacagggctggcactggcccctctagc
actgagatcaacgcaaccacactggaggatgtgcccagccagccgccccagaacgtgcgg
gccatctcggtgacttcagacgaggcagtgatcacatgggcggagcccccgcgtctgacg
ctgcatggcgtgctgaagggctaccgcgtggtgttctggtccctcttccccgacggaggt
gggtgctgtgggggccaggcacaggggtcgatgcagaaatggggagagatgcagaacatc
actacaactcgtgagcaggtggagctgagagggctggagaagtttactaactacagtgtc
caggtgctggcctacacacaggctggggacggggtcaggagcaatgtcctgtacatccaa
acccgcgaggacctcccaggtcctccagctggtatcaaagccgtgccctcatctcccagc
agtgtggttgtgtcctggctacccccccataaacccaatggtgtcatccgcaagtacacc
atctactgctccagcccaggctccggacagccgcaagcctgggtagaagctgagataggg
agggagagagaaagagagaaaaaggctcccagtgagtatgaggccaacccagagatgttg
ttctacaggatcacccatctgacccgcggtaaacagtacctcatctgggctgccgctgtg
acaaccgctggccgcggcaatatcagcgaaaaggtcaccgtggagcctgctgggaaagcc
ccagctaagatcctgtcattcgggggcacggtgaccactccctggatgaaggagatccgt
ctgccctgcagctcagtgggagaacccaccccaaccttcaaatggaccaaagacagtgag
gactcgacaatccctgtgactgtggacggacagcgtcagatcctgtccaacggtactctg
gtgctgcgttccgtcaaagctgaggattctgggtactacacgtgcacggccaccaatacg
ctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccagaccagccccgt
ctgacagtctccaccacctccacctcttccatcaccctggcctggatccctggggacaac
ggaggcagctccatcagaggtttcgtcctgcagtactcagtggacaacacggaggagtgg
agggatgtgttcattagttccagtgagcgttcctttaggctggacaacctgcgctgtggc
acctggtacaaggtcaaactggcagccaaaaacagtgtgggctcaggacgcatctctgag
atcatcgaggccaagacgcacggacgagagcctgtgttcaacaaggagcagcccttgctc
acccacatcaactccacccatgcggggctcaacctacagggctggaccagcggaggctgc
cccatcaccgctctgctgctggacttccggcccaagggcacgtgggcatggcagagcctg
aaggccaatgccacggcccagctcttcctcagcgagctacgcgaggccacctggtacgaa
ctgaagatgaaggcctgtaacagcgctggctgtgggaaccagagctcccagttcgccacc
acagactatgacggcagtaccatccctcctataaactcagcccaggaggacagggacgat
gtgaagaagctgttctccataggctctcctgtcatcctggtcaccctgggcgtcgccctg
ctcttcatcatccgcaagaaacgcaaggagaagagactgaaacgactcagagatgctaag
agccttgcagagatgcttatcagcagtaagaacaatcgcagcatggacaccccagtgaag
ggtcctccacagggcccccggctccacatcgacatcccccgtgtccagctgctcatcgag
gacaaggaggggatcaagcagataggtgaggacaaggcagcggccccagtgacggacacc
gagttcagccaatcagtgaatccacagagcttctgcacaggcgtgtcgctgcaccacccc
gccctcatccagaacacagggcccttgattgacatgtcagacatccgccctggaaccaac
ccagtgtcgaggaagagtgtgaagtcagcccacagctccaggaaccgttactccagccag
tggaccctgagcaggccgggccagagccaatcaactgcctctgcaagaactctgacctct
gactggcgcaccatgggctctcacggcatcaccgccaccgagagtgacagctacagcgcc
agcctgtcccaggacactgataagggtcgtaacagcatggtgtccacagagagtgcatcg
tctacgtacgaggaactggcgcgggcctacgaacacgccaaactggaggagcacctgcag
cacgccaagttcaccatcacagaatgtttcatctccgacagctcttctgaccagatgacc
acgggcaccaacgacccggctgacagcatgacatcactcagcacgccgtccgagacgggc
ctttgtcgcttcaccgcctcgccacccaaaccccaggactatgaccgcggcagacctacc
aacgtggccgtgcccatcccccaccgcgccaacaagagtgaattctgcaacctcccgctc
tacatgaagacggaccctttcttccggaaacaggcggagctgcatgacccgtgccctgct
gtgccgccccgggaggcctccatccgcagcctggcacagcggtcataccacacccagggt
cgtcacatgactctggacccatccaagcagcaggccctgacgctgggacactctgggctg
ggcagcctgggcatgagctcgggtactgccaccctgccccagaggactctcactatgccc
ggttccaaccctgcagccacagcctccacctccagcaccagcagcaatcccactggctcc
agcaccaagatggggggctccagagactcactgctagagaacagctcctcagcgttgggc
agactgcagaagcaaggggtcggggcctactccaagtcttacacactggtgtag
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integrated database retrieval system
