Coregonus clupeaformis (lake whitefish): 121579982
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Entry
121579982 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121579982
09142 Cell motility
04810 Regulation of actin cytoskeleton
121579982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121579982
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121579982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
GTP_EFTU
FF
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
121579982
NCBI-ProteinID:
XP_045080457
LinkDB
All DBs
Position
13:complement(57711876..57736523)
Genome browser
AA seq
1512 aa
AA seq
DB search
MIMMAKKQDAKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLS
TSDFGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKR
AASTKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKIQADGFMLCVDVSRGMNRNFDDQLK
FVTNLYGQLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLA
FLTLVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRM
HTSSEFNEYVFLEGTAKCKKLFQQLVYRLKQEHIERRRKIYLSTLPLALSSLVPDLGEID
QLSWSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETAPAEDIFDTH
LEHLRNECKRAEMRQEFKHKLACSPFVTPGKPWEESRSFIMNEDFYQWLEESEYLDLYNR
HQKEIIGHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLPAE
RDALVLKHIHFVYHPTKETCPSSPQCGDFKIEQLLASRFPTCYPFFDVKSHFGEMKADRI
NLVILGKDGLAREFANEIRALCTNDDRYVLDGKMYELTLRPIEGNVRLPVNSFHTPTFTP
HGCMCLYNSKESLTYVVESIERLRESTIGRRDIHIAQLLTSLLLVTKRGVGTYADIGGET
ALGLITQGQQVARRLQCSFLDPASPGVGYGHNVNESQINQVLRGLLDSRRSSSFSSSSPP
LPPQPPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVIL
EQTVGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEVQDIIP
VQVLAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRIEMFQPF
LMEVVEKRNIVEATHMYDNVAEACINETAYSPRCSSPSPGTMFLDSDMDDVEPSPPYYDG
TLTSHGGSFNLPDLDSSDVSVISDISSFENKLNSKAPPQVRPKPTVTFDFRKVGRNPYNT
DTMGHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRASNEEIIYSVPHDSTQGKIIT
IRNANRMHSNGNGSDSEVDSSSLERHKKLSAAGVKPRLYRDRSKRLGKFSSFRTSFIGSD
DEMGALPKTKEDEFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRPSIPKPLESS
YFGVPLVNVVSPDRPIPLFIDKCVRFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGL
DLVEKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKINDREQRLYTMKDVLRKFP
RENYDVFRFVMSHLRKVTQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTII
ETFIHQCAFFFYNQPLLDSPTGLAGLPASPTTTLTGGSAYSCYRSSPPPTATHFNPLQQS
PRPPPSLPCSPS
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggcgaaaaagcaagatgctaagtcacccacatacaaccttattgtggtg
ggtttgtcagggactgagaaagagaagggccagtgtggcgtgggcaagtcctgtctgtgc
aaccgctttgtgcgccccagcgccgatgacttctatctggaccacacatcagtgctgagc
accagtgactttgggggcagagtggttaacaatgaccacttcctgttctggggggaggtg
ggccgggtggtggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttc
attgatgaccagacgttccagccacaccgcagtactgccatgcagccctacatcaagagg
gcggcctccaccaagctggcctctgcagagaagctgatgtacttctgcacggaccagctg
gggctggagcaggactttgagcagaagcagatgcctgagggcaagatacaggctgacgga
ttcatgctctgtgtggacgtcagtagggggatgaaccgcaactttgacgaccagttgaag
tttgtcacaaacctttacggtcagctgagcaaaacaaagaagcccattgtgctggtctta
accaagtgcgatgagggagttgaacgctacatcaaagattctcacacctttgccatcact
aaaaagagtcttccagtggtggagacgtctgcgcgctctaacatcaatgttgacctagcc
ttccttactttggtgcaactcattgataagagcaggggcaagcccaagatcattccttac
tttgaggccctcaagctccagagtcagcagatagccttggctaaagaccgatacgaatgg
ctagtcaaccgcatagtgaagaaccacaacgagacctggcttaacaccagccgacgcatg
cacacctcttcagagttcaatgaatacgtctttctggagggtacagcaaaatgcaagaag
ctcttccagcagcttgtgtaccgtttgaaacaggagcacattgagagacgtcggaaaatc
tatctgagcactcttcctctagcacttagctccctggtgcctgacctgggtgagattgac
cagctgagctggtctggggttcagaaggtcctggagtccaagcagcactttgcccactgg
tttgtggttctggaggactctccatgggaggacacgtctcacatagacaacatggaggat
gagcgcatcccctcagacctgctggagacggccccagccgaggacattttcgacacccac
ctggagcacctgaggaatgagtgcaagcgggctgagatgaggcaggagttcaagcacaag
ctggcctgttctccctttgtcacgcctggaaagccctgggaagagtcccgcagcttcatc
atgaatgaagacttctaccaatggttggaggaatcagagtacctggacctctacaaccgc
caccagaaagagatcatcggccacgctaaagaggacttccaggagcttctgctggagtac
tctgagctcttctatgagctggaggtagacgcgaagcccagcaaggagaagatgggggcc
atccaggaggttttaggggaggagcagcggttcaaagccctgcagaagcttccagctgag
agagatgctctggtgttgaagcatatccactttgtctaccaccccaccaaggagacctgc
cccagcagcccacagtgtggcgacttcaagatagagcagctcctggcttcacgcttccca
acatgctacccattcttcgacgtgaagtcccattttggggaaatgaaagcagaccgaatc
aaccttgtgatattgggcaaagacggactggctagggagtttgcaaatgagatcagagct
ctctgtaccaatgatgaccggtatgtgttggatgggaagatgtatgagctcaccctgcga
cctatcgagggcaacgtacgacttcctgtaaactccttccacactcccaccttcacaccc
catgggtgcatgtgtctgtacaactcaaaagagtccttaacctacgtcgtagaaagcatt
gagaggttgcgggagtcaacaatcggtagaagggacatccatatagctcagcttttaacg
tctctgctcttggttactaaaaggggtgtagggacgtatgcagatattgggggagaaact
gctttaggtctgataacacagggacagcaggtagcaaggagactgcagtgtagcttccta
gacccagcctcccctggtgtgggctatgggcacaatgtgaatgagagtcagatcaaccaa
gtattgaggggtcttctggactctagaaggagctcatctttcagtagcagctccccgcct
ctgccccctcaacctccaggtcccagagactctcctcaccagcccagcccagaggcagac
atccgcatcgtcatgtgcttgatgtgtggagacaactacgacgtggaacagctcctctct
cccttcctactgcctcagcactgcaggccaacatccaacagtggaacctcagtgatactg
gagcagacagtgggacctcacaaacaggtgattgagctctccctcctttcctaccacgcc
tccttctccctgaggaagagcagattagtgcacggttacatcgctgtgtactcagcccgc
cgcaaggcctctctggagaccctgtgtgccttcctgtgtgaggtccaggacatcattcct
gttcaggtgctggccgtaggggagagccaggtggagctcacagaaagtgagtctgccaga
gagcagctggtccagggagaggagctggcccaagagatagagggcaggttcaacagtgtg
gtgtgtgggtccggaggggtggtgggcggcctgcacaggatagagatgttccagcccttc
ctgatggaggtggtggagaaacgcaacatcgtggaggccactcacatgtatgataacgtg
gctgaggcctgcattaacgagactgcctactcccctcgctgtagctcccccagccccggc
accatgttcctagactctgacatggatgacgtggagccctccccaccttactacgacggc
acactcacctcccatggtgggagcttcaatctgcctgacctggactccagcgatgtctct
gtcatctctgacatcagctcctttgagaacaagctcaacagcaaagccccgccccaggtg
agacccaagcccactgtgacatttgacttccggaaggtgggccgaaacccctacaacaca
gacaccatgggccaccgtcgctccctgccctccgctgtgacatgggtgcccggtggggac
ggaggttacgacccctcggactatgcagagcccatggatgctgtgtccaagccccgggcc
agcaatgaggagatcatatactctgtgccccacgacagcacgcagggcaagattattacc
atccgcaatgccaaccggatgcactccaacgggaacggctcagacagtgaggtggacagc
agctccctggagcgccacaagaagttatcggcggcgggggtaaagccacggctgtaccgc
gaccgctccaaacgcctgggcaagttcagcagcttccgcaccagcttcattggcagtgac
gacgagatgggggccctgccaaaaaccaaggaggatgagttcggaaccctgaaaggagac
atcatcaacgaggagggagaggaccccaagaaaaggaacattctgaagagcctgcggcga
actgccaagaaaaccagaccaaagcctcggccctctattcctaagcccctggagagcagc
tacttcggagtgcccctggtcaacgtggtgtccccagacagacctatcccactcttcatc
gacaagtgtgtccgcttcattgagaccacaggtctcaacacagaggggctctacagggtg
agcgggaacaagtgtgagatggagagcatgcagaggcagtttgaccaggaccatgggctg
gacctggtggagaaggactttgccatcaacacggtggctggggctctgaaggcctttttc
tctgagctgccagagcccctggtgccctgcatcctgcaagtggagctgctcgaggccttc
aagatcaacgacagggaacagaggctgtacaccatgaaggatgtgctgaggaagttcccc
agggagaactatgacgtcttcagatttgtcatgagccacttacgcaaggtgacccagctg
agcagacagaacctgatgaccagtgagaatctgtccatctgtttctggcctactctgatg
cggccagacttcaccaccatggacgccctgacggccacgcggacctaccagacaatcatc
gagaccttcatccaccagtgtgctttcttcttctacaaccagccccttctggactccccc
actggcctggctggcctccctgcctcccccaccaccacccttaccgggggctctgcctac
tcctgctaccgctcctcccctccccccactgccacgcacttcaaccccctgcagcagtcg
ccccgaccaccccccagtctcccctgcagtccctcctga
DBGET
integrated database retrieval system
