Coregonus clupeaformis (lake whitefish): 121579993
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Entry
121579993 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121579993
00071 Fatty acid degradation
121579993
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121579993
09143 Cell growth and death
04216 Ferroptosis
121579993
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121579993
03320 PPAR signaling pathway
121579993
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121579993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121579993
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121579993
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121579993
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121579993
Exosomal proteins of breast cancer cells
121579993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121579993
NCBI-ProteinID:
XP_045080464
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All DBs
Position
13:57965845..57989582
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AA seq
710 aa
AA seq
DB search
MTFKVDMHYVVFLPVYLLMWLYTLITFIPWYFLTDAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQHFGNADCLGTREVLNEENEMQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSAELLETKLKNVLPEMRNLKHVIYVDNKSISRTGYPE
GIQIYSMQAVQELGAKPDNLSVAVQRPXATDLAVVMYTSGSTGRPKGVMIIHSNLIAGMT
GQCERIPGLGPNDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMNYVQRTLFKLGYNYKLEQIKLGYDAPLC
NMLLFKKVKALLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIDNI
CAYANSDQNYVISFVVPNQKQLTTLANNNGISVAWEDICNHPAMEKEVLKAIKEVAVSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaagtagacatgcattacgtagtcttcttgcctgtgtacctattgatgtgg
ctgtacacgctcatcacatttatcccatggtatttcctcactgatgctgggaagaagaaa
accatggccaagagagagaaagccaagtccaccacaggcaaagctgagggcccctatcgt
tgtgtggagaactttgacaacctggcacgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcacttcggcaacgcagactgcctgggcaccagggag
gtcctaaatgaggagaacgagatgcaacccagcggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagccatctcggtagt
ggactggcagcactgggccagcagcccaagagtaccattgccatcttctgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatgggctgaatgagtgtggggccactcac
ctgatcaccagcgcagagctactggagactaaactcaagaatgttttgccagaaatgcgc
aacctgaagcacgttatatatgtggacaacaagagcatcagcaggacgggctaccctgag
ggcattcagatctacagcatgcaggcagtacaggagttgggagccaaacctgacaacttg
agtgtagcggtgcagcggcccncagccacagacctggccgtggtcatgtacaccagcggc
tcaactggacgacccaaaggagtcatgatcatccacagcaacctgatcgctggcatgacg
ggccagtgtgagaggatcccaggactggggccaaacgatacctacattggctacctgcct
ctagctcatgtgctggaaatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaagggcagtaaa
ggagactgctctgtgttgaggcctactctgatggcagctgtaccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgaactatgtgcagaggacactcttt
aaactgggctacaactacaaattggaacagatcaaattgggctacgatgccccactctgc
aacatgctgctgtttaagaaggtgaaggctctgctgggagggaacatcaggatgatgctg
tcaggaggagcgcccctgtcctccgccacccagcgcttcatgaatatctgcttctgctgc
cccgtgggacagggctatggcctcacagagacctgcggagcgggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggtggatacaccagccaggaccagccccacccccgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagcgagcacctgaacaatgacttc
tgggtggatgagcagggccagagatggttttgtaccggggatgtgggggagatccaccct
gatggctgtctgcagatagtggaccgtaagaaggacctagtcaaactgcaggcaggagaa
tacgtgtccttggggaaagtggagtctgctctgaagaactgcccccttattgacaacatc
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtaccgaaccagaag
cagctgacaactctggccaataacaatggcataagtgttgcctgggaggacatctgtaac
cacccagccatggagaaggaggtcctgaaggccatcaaagaggtggctgtctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacagatgcattcaaactgaagaggaaggagctgaagaatcacttccag
actgatatcgagagaatgtacggagggaagtag
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