Coregonus clupeaformis (lake whitefish): 121580006
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Entry
121580006 CDS
T08357
Name
(RefSeq) neurite extension and migration factor
KO
K25862
neurite extension and migration factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121580006
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Gene cluster
GFIT
Motif
Pfam:
DUF4683
DUF5550
Motif
Other DBs
NCBI-GeneID:
121580006
NCBI-ProteinID:
XP_041751015
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Position
13:27241728..27269452
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AA seq
1380 aa
AA seq
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MDVFQEPNFAVLASNLEQINKEDENESHNQDSSLKPDSASTPPKANPPKGGPGSERTSLS
PSSPLSPTETPEPSTTTTTTDDSSSTHAISLTSSCSTKLVSHWALPEDCSDKAAFTMMET
GSVSALSGGDCLMPQSRTCLGCFIETKDATELEPGLGLGRDYDPCPVSCPDMAMQCMSSG
DGIRYGDQLLSDQLLSYPEHKVRGEEKTDEEKSAEDSDSEDATSKSIYEGLLLDKCNGEE
ALLANSSQDWGCFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDEDSTLGSDVC
SLKIRYESFQDNVREKTNTIQEETQFNFFPSVVAKKEGEGAVKKEAEGPQVNGEKVEVWV
TGERVDKNNSSSSAEVMPNVSPESSYLFDFNNSTEDSGEYSDDSSCTGSSLDTCQTKRKY
CFLSRENSSSSSQLSYGLRSKRKVRYSDDYLYDVDSIESERNTEKKEKQPVGPKKEEDDD
WCPKKRRKSSRKERPVIIKYIIINRFKGEKHMLVKLGKIDTSETTVSLSKDLVHKYQRMA
PLKDYWQKRRQEMQEQRRLAAGDKNRFPNGCRRSLNSSLTKRKYRIANRVRIQRIHTVEL
SPNHADHKQEVRAAEDQAACIDMASITTTTSDCAARLDQGSVTGKSRSLEREGKRLGNKI
LKIRKFKSEARLRSKNITEAQQEDGKTVIHLRKVAPLSPNQKTDIVYSKAGSPQLCDDST
VSVDPTEKSTFTPAPCSSSSTMTHPVNVNSGLPVIPGGYLQTLLDASDSSSNTGLSYYSQ
QQQQNPRQQFPHGLYQEENPFTNLQLAQSCVLSPPSESELQQSPSNSNQMEPNFTHISWQ
SGGEPLPFTPDIPPESAGFSSTMPLPMTNNLPLSGYSQVNVDGNRLLNDKAHLPEEPPGP
DSTLQVSRSAEEEQVQFHRVALNTDNSRLASYDSMGSLSATSSNYSSMSHKSCEKESDED
VNDNFLAHCSPKLVIQQSTDEITPLRESTDLLDISNFTPDKFRHSSLSEMSPPDTPNLSP
QVMGPEMRESLGKASEFQGETGDITLSATPDGTKWDCNVLPQHNHDGRAINNHQFQFHTF
NDNDGTGLDDKIDGTDVFDEQAESIGGRTKGPKSKRKTTSKQKTKAPRAPKTEKNKAPRQ
NSRSSKKLKALLDAKAKAKAKGEESEGLAGLSEDWPLLVEHGGGWADGNNNNSAVDDDQR
EFEEPSNILSNIVSGMAEVERFMKVSIEPLWDPMSGLCQPPEANSLKTKTLKILAGTTAD
VRKKGGYATSPGTGRGRKATGRGAKNQAKFIPSNPFFPPLTVDCNMFNKSSLGIPGICGP
AHKKMYRHKTSAKFARDENNTGKRDSGKNAALMASYEKLSGTACPTLTMSKFSLWLSTNV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttcaagaacccaactttgctgtgctggcttcaaacctggaacagatcaac
aaagaggatgagaatgaatcacacaaccaggacagttctctgaagccagacagcgccagt
acccctcctaaagccaatccaccaaaaggaggccctgggagtgagaggacctcactgagc
ccatcctcacctctcagcccaacagagacccctgagcccagcaccaccaccactaccact
gatgactcctcctccacccacgccatctccctcacctcctcctgctccaccaagttagtg
agtcactgggctcttccagaggactgtagtgacaaggctgccttcaccatgatggagaca
gggagtgtctcggccctgtctgggggggactgcctcatgccacagagccgcacctgcctg
ggctgcttcattgagaccaaggacgctacagagcttgagccagggctgggcctgggccgg
gactacgacccctgtcctgtctcctgtcctgacatggccatgcagtgcatgagttctggg
gatggtatccgctacggggatcagctgctctccgaccagctcctcagctacccagagcac
aaggtcaggggggaggagaagacagatgaagagaagtcagcggaggacagtgactcggag
gatgccacgtcaaagagtatctacgaaggcctgctcctggataagtgcaatggtgaggag
gctctgctggccaactccagccaggactggggctgctttgagtcctttattagcgagagt
aagatcgagctgctggacctctgctctaagaatgagctctctgtcaacctcttctcagaa
gaggacgtagacaactatatgtttgatgatgaggactccaccctgggcagcgacgtgtgc
tcgctgaagatacgttacgagtccttccaggacaacgtccgagagaagaccaataccatt
caggaggaaacccagttcaacttcttcccgagcgtcgtggccaaaaaggagggcgaggga
gcagtgaagaaggaagctgaagggccgcaggtgaatggagagaaggttgaagtctgggtg
actggagaaagggttgacaaaaacaacagcagcagctctgctgaagtgatgccaaatgtc
agtccagagagcagctacctgtttgacttcaacaactccacagaggactctggagagtac
agtgatgacagctcctgtactggatcctcccttgacacctgccagaccaaacggaaatac
tgcttcctctccagggagaactccagctcctctagccagctgagctatgggctgaggtcc
aagaggaaagtcagatacagcgacgactatctgtatgacgtggattctattgagagtgag
aggaacacagagaaaaaagagaagcagccggtgggtccaaaaaaagaggaggatgacgac
tggtgtccaaagaagaggagaaaatcctcacgaaaagagcgtccggtgataatcaaatac
atcatcataaaccgatttaaaggggagaagcacatgttagtaaagcttggcaaaattgac
acatcagagacaacagtaagcttaagtaaggacttagttcataagtaccagagaatggcc
cctctgaaagactactggcaaaagaggcgccaggaaatgcaggagcagcgcaggctggct
gctggtgataaaaacagatttccgaatggctgcaggcgttcccttaattctagcctgaca
aaacgaaaatacaggattgcaaatagagtccggattcaaagaattcacactgtagagctc
tcgccaaaccacgccgatcacaagcaagaggtgcgagcagctgaggatcaggctgcctgt
atagatatggcatcaataacaacaacgacctccgactgtgctgcaagattagaccaaggc
agtgtgacaggaaaaagtagatcgctagagagggagggaaaaagacttggaaataagatt
ttgaaaataaggaaatttaaaagcgaggccagactgaggtcgaaaaacattacagaggct
cagcaggaggatggtaaaactgtgatacacctacgaaaggttgccccactatccccaaat
cagaaaactgacattgtttattccaaagcaggcagcccacagctttgtgatgactccact
gtcagtgtcgaccccactgaaaagtccacttttacaccagcaccctgctcctcttccagc
acaatgacccatcctgtaaatgtgaatagtggtctacctgtcatccccggaggctacctg
cagacattactagatgcctctgactcatccagtaacactggactgtcatattactcccag
cagcagcagcagaatccccgacaacagtttccccatggcctctaccaggaggagaatccc
ttcactaacctacagctggcccagagctgtgttctatcccctccctcagagtccgagctc
caacaatccccctctaactccaatcagatggaaccaaacttcactcacatatcatggcag
tctggaggtgaaccgctaccatttacacctgacattccacctgaatctgctggcttttcc
agcaccatgcctttgccaatgacaaacaacttgccattgtcaggatatagtcaagtcaat
gtagatggcaacagactgctgaatgataaggcacatttacctgaagagccaccaggacca
gactcaaccctacaggtcagccggtcagctgaagaggaacaggtgcagttccatagagtc
gctctaaacacagacaacagcaggctggccagctatgactctatgggttcactgtctgcc
acctccagcaactacagctctatgagtcacaagtcctgtgagaaggagagtgacgaggat
gtgaacgacaacttcttggcccactgtagtcccaaactggtgatccagcaaagtactgat
gaaatcactccccttagggaatccacagacctactggacatctccaacttcacccccgat
aagtttaggcactcgtcgttgtcagagatgtcgccacccgacacaccaaatctctcccca
caggtgatgggtccagaaatgagggaaagcctaggaaaggccagtgagtttcaaggagag
acaggagacattactctctcagctacacctgatgggactaagtgggactgtaatgtcctg
ccacaacataatcatgatggtagagcgataaacaatcatcagttccagttccatactttc
aatgacaatgacggcacaggcttagatgataagattgacggcacggacgtctttgatgag
caggctgaatccattggaggccgaactaaaggtcccaagtcaaaaaggaaaacaacaagt
aaacagaaaaccaaggctccaagggctcccaagacagagaagaacaaagcccctagacag
aattctcgttcatccaaaaagctaaaagccctgcttgatgcaaaggcaaaggcaaaggcg
aaaggtgaagaaagtgaaggtcttgctggactgtcagaagactggcctttactggtggag
cacggtgggggctgggcagacggtaacaacaacaacagtgctgtggatgatgaccagcga
gagtttgaggagccctccaacatcctgtccaacatagtctctgggatggcagaggtcgag
aggtttatgaaggtgtccatcgagccactgtgggaccccatgtctggactctgtcagcct
ccagaggccaacagccttaaaactaagacactcaaaatcctggcgggaacaacagctgac
gtcaggaaaaagggtggttatgccacctcccctgggacaggaaggggcaggaaggcaact
ggcaggggtgccaaaaaccaggccaagttcattccttcaaaccccttcttcccccctctc
actgtagactgcaacatgttcaacaagtccagcctcggtatacctggcatctgtgggccc
gcacacaaaaaaatgtaccgtcacaaaaccagtgcaaaatttgctcgagacgaaaacaat
acagggaagcgggactcgggcaagaacgcagctctgatggcctcttatgagaaactgagc
ggaacagcttgccccaccttaacaatgtccaaattcagtctgtggctctccacaaatgtt
taa
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