Coregonus clupeaformis (lake whitefish): 121580020
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Entry
121580020 CDS
T08357
Symbol
onecut1
Name
(RefSeq) hepatocyte nuclear factor 6 isoform X1
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580020 (onecut1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
121580020 (onecut1)
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Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121580020
NCBI-ProteinID:
XP_041751038
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Position
1:93191433..93197305
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AA seq
507 aa
AA seq
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MNAQLSMESLGDLSHESVAGPGELLVGHSPHPRPGGGRGLAHRSMGMTSLLDGGEYHSHH
GHNTGHPGHHLHPAMSMCETPPGMSASTYTTLTPLQPPLPPISTVADKFSHHHHHHHPHH
HPHHPHNHHQRLPGNVTGSFTFMRDERGLAPINNLYSPYHHKDAPGMGQSLSPLSGSGLA
GLHSSQAGLPPYAHPGVSASMPGEKMQLTPGGFEAHHPTMLARHADQHLTSSGNMLHING
LHHHHPHAHLGASGHVLGHGNPRDNNSQSQASGPGVQVHGVGGGGGGTGGSSTGQMEEVN
TKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKW
LQEPEFTRMSALRLAGERTLACKRKDQDQGHGHCKVGGDRDGSGGGSGGSSGGNHSGGNH
SSNSGHSKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELTTVSNFFMNARR
RSLDKWLDENGGSSHSANSSSSTCSKA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaactgtccatggagagcctcggcgacctgagccatgagtctgtggccggt
ccaggagagctgctagttggccacagccctcacccccgcccgggtgggggccgagggttg
gcgcaccgctccatgggcatgacgagcctgctagacgggggagaataccactcccatcac
ggacacaacactggacaccccggccatcacctgcaccccgccatgagtatgtgcgagacc
ccccctggaatgagcgcgagcacctacaccaccctcacacctctccagccccccctaccc
cccatctccactgtggcagacaagttctctcatcatcaccatcatcatcatcctcaccac
catcctcatcatcctcataatcatcatcagcgactccccggtaatgtcaccggcagcttt
acgtttatgagggatgagagggggctggcaccgatcaacaacctctactccccctaccac
cacaaagacgcccctgggatgggacagagcctctccccactgtctggctctggcctggcc
ggcctacacagctcccaggccggcctgcctccctatgcccaccccggggtctcagcctcc
atgccgggggagaagatgcagctgactcccggcgggttcgaggctcatcaccccaccatg
ctggccagacacgccgaccagcacctcacctcctcggggaacatgctccatatcaatggc
ctccatcaccaccacccccatgcccacctcggagcctcggggcacgtcctgggccacggg
aacccccgggacaacaacagccagagccaggcctcagggcccggggttcaagtccacggg
gttggtggtggtggtggcggtaccgggggcagttcgacgggtcaaatggaagaagtaaac
accaaagaagtagctcagaggatcaccacagagctgaagcgttactccatcccccaggct
atcttcgcccagagggtgttgtgtcggtcccagggaaccctgtcagacctgctccggaac
cccaagccctggtccaagctcaagtccggccgggagaccttccgccggatgtggaagtgg
ctgcaggagcctgagttcacacgcatgagcgcgctcaggctcgcaggtgagcgaaccctc
gcgtgtaagcgcaaggaccaggaccagggccatggccactgtaaagttggtggtgaccgt
gacggcagcggtggtggcagcggtggcagcagtggcggcaaccacagcggcggcaaccac
agcagcaatagtggccactccaagaagcctcggctggtgtttaccgacgtccagagaaga
accctccacgccatcttcaaggagaacaagcgtccgtccaaggagcttcagatcaccatc
agccagcagctgggcttggagttgaccaccgtctcaaatttcttcatgaacgcacgccga
cgcagcctcgacaagtggctagacgaaaacggaggctcctcccactccgctaattcctcc
tcctccacctgcagcaaagcctga
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