Coregonus clupeaformis (lake whitefish): 121580110
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Entry
121580110 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121580110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121580110
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121580110
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121580110
NCBI-ProteinID:
XP_041751094
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Position
3:43834235..43883523
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AA seq
784 aa
AA seq
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MDFSDQREMTKQPANAPTGFNPLYQPEGAVGVSANKPDNALNQTSAAYPAPQPAPSNESK
TLCPTENKPGEPGEVSKVYGTFKNAAPAVPGSVATNSAFCKDSTSSAGGSAARGIPVQYG
DPLRATGEQNTASGNWTTMSQTTIILGADGNTSVQPGAVTGEEDEDESGDENKARGNWTN
KLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFAS
QGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWN
TFDCKDKDMLLLDTCILHDKNFTSIKNSSFCLSAQAIGNLTKLVNMTYPDNKTYVSPSEE
YFKYNVLHISKGIEYPGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVL
VILLFRGVTLPGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNK
FHNNCYRDTIIVCIVNSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEA
LTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACF
FFLGFPMVTENGMYMLQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQP
NRFWRICWAFVTPTILTGILGLSLYQWKVMTYEDYTYPPWSMVMGWLMVLCSVIWIPIMF
VIKMHLAPGSFMERLKLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQL
GAYQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgaccagagagagatgaccaaacagccggccaatgctcctaccggtttt
aacccattgtaccagcccgagggagcggtgggagtttcagcaaataaaccggataatgcc
cttaaccaaacgtccgccgcttacccggcccctcagccagcaccatctaacgagagcaaa
actttatgtcccacggaaaataaaccgggagaaccgggagaagtcagtaaagtctatggg
acttttaaaaacgccgctccggcggtgcctggatccgtggctacgaactcggccttctgt
aaggattctaccagctcagctggtggttctgctgcccggggtatccctgtccagtacggg
gacccgcttagggccaccggggagcaaaacactgcatcgggcaactggaccaccatgagc
cagaccaccatcattctgggcgcagatggcaacacgtctgttcagcccggcgccgtgacg
ggggaggaagacgaggacgagagtggagatgagaataaggccaggggaaactggactaat
aaattggatttcatcctgtccatggttggctatgccgtgggactgggaaacgtgtggagg
tttccataccttgccttccaaaatggtggaggtgcttttttgatcccctacctgataatg
ttgtgcctcgccgggatccctatctttttattggaggtttccctgggtcagtttgccagc
cagggcccggtgtccgtgtggaaagccatcccggctctacaaggttgcgggattgccatg
ttgataatatctgtcttgatagccatatactataacattataatgtgctggacactgtac
tacctgttcgcttcgttgaagggctcactgccatgggctaactgtaagaacgagtggaac
acgtttgactgtaaggacaaagacatgcttctcttagacacgtgtatccttcatgataaa
aacttcacctctataaagaacagctcgttctgtctgtcggctcaagccattggaaacctg
accaaactggttaacatgacctatccggataacaaaacctacgtcagccccagcgaggag
tacttcaagtacaatgtcttacacatctccaaagggatagagtaccctggagacatccgc
tggcccctcgcaggctgcctgttgctggcctggttgatagtctacctctccctggccaaa
ggaatcaagtcatcagggaaagtggtgtatttcacagctacgttcccctatgtggttctg
gtcattctgttgttcagaggagtgaccctcccaggggctggtgacggcatcctctacttc
atcacacccaagtgggagaaactcaatgatgctaaggtgtggaaggatgctgccacccag
atcttcttctctctgtcagcagcctggggaggcctcatcacactgtcctcttacaacaag
ttccacaacaactgctacagggacaccatcatagtgtgcatagttaacagtgccaccagt
atattcgctgggtttgtcatcttctccgtcattggattcatggcccatgaactgaaggtg
cccattgagaaggtggcagatgaaggtccaggcatagcgttcgtggtgtacccggaggct
ctgaccagacttccactctctccgttctgggccatcatcttcttcctcatgctgctgacc
ctcggcctggataccatgtttgccaccattgagaccatagtgacgtcagtgtcagatgag
ttcccccagtacctgagaaagaacaagcctctcttcacgctcatttgctgtgcctgtttc
ttcttcctgggattccctatggtcacagagaatgggatgtacatgctacagttggtggac
acatacgctgcctcttactctctggtcatcattgccatctgtgagctgatcggaatctcc
tacttctatggcctgcagaggttctgcgaggacattgaaatgatgattggcttccaacca
aaccgcttctggagaatctgctgggcctttgtgactcctaccattctgactggtatcctg
gggctgagtctgtaccagtggaaggtgatgacctatgaggactacacctaccccccctgg
tcaatggtgatgggctggctgatggtgttgtgttctgtcatctggatcccaatcatgttt
gtcatcaaaatgcacttggccccaggcagcttcatggagcgtctgaagcttgtgtgctcc
cctcagcctgactggggtcccttcctggcaaagcacagaggggagcgctacaagaacatg
atggacccccatggttccaactccctgggcctcaaactgccccccaaagatttccagctg
ggcgcctaccagtag
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