Coregonus clupeaformis (lake whitefish): 121580156
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Entry
121580156 CDS
T08357
Name
(RefSeq) POU domain, class 4, transcription factor 3
KO
K09366
POU domain transcription factor, class 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580156
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121580156
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
Motif
Other DBs
NCBI-GeneID:
121580156
NCBI-ProteinID:
XP_041751149
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Position
13:complement(10394021..10396248)
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AA seq
336 aa
AA seq
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MMTMNGKQHFSMHPVLQEPKYSGLQASSEGMRRVCLPAPQLQGNIFGGFDESLLARAEAL
AAADIVSHGKSHHFKPDVTYHTMSSVPCTSNSSTVPISHPSTLTSHQHHHHLNQSLEGDL
LDHISSSLSVSGMGAPDSSMMTTHQHHLQTMGHLHQAMAMGHPHSLSVHNGMSCVNDVES
DPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMI
ALKPVLQAWLEEAEAAYREKNSKPDLFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSE
KIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatgaacggcaagcagcatttctctatgcacccggtgctgcaggagcccaaa
tactctggcctgcaagcgagttcggaaggcatgcgcagagtttgtctgcctgccccgcag
ctccagggcaatatcttcggtggctttgatgagagtctactggcacgcgcggaagctctg
gcggctgctgacatagtctctcacggcaagagtcaccatttcaagccagacgtgacttac
cataccatgagtagtgtcccctgcacctccaactcctctaccgtgcccatctcccatcct
tccaccctgacctctcaccaacaccaccaccacctcaaccagagcttggaaggggatctc
ctggatcacatctcgtccagtctctcagtgagcgggatgggggctccggattcctctatg
atgaccacgcaccagcaccacctccagaccatgggtcacctccaccaggctatggccatg
ggtcatccgcactctctatctgtgcacaacggaatgtcgtgtgtcaacgacgtggagtcg
gatcctagggagctggaagccttcgctgagcggttcaaacaaaggaggataaagctcgga
gtgacccaggcggacgttggctcagccctcgccaacctgaagatacccggggtgggctct
ctcagccagagtactatctgtaggtttgagtccctcaccctctctcacaataatatgatt
gctctaaaacctgtcctccaagcctggctcgaggaggccgaggctgcttaccgggagaaa
aacagcaagccagacctttttaatggcaacgaaaggaaacgaaaacgcacttcgatagcc
gcacctgagaagcgctcgttggaggcatattttgcgatccagccccgtccctcttcggaa
aaaattgctgcaattgctgaaaaactggaccttaaaaagaacgtggttcgtgtgtggttt
tgcaaccaacgacaaaaacagaaaaggatgaaatattctgctgtgcattag
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