Coregonus clupeaformis (lake whitefish): 121580201
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Entry
121580201 CDS
T08357
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121580201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121580201
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Serotonin (5-HT3)
121580201
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121580201
NCBI-ProteinID:
XP_041751192
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Position
13
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AA seq
454 aa
AA seq
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MLSVFWLLLSSAPLAELVADKPKRSALNQLTRTLLRKNDCGVRPVQNWTSPILIHTDLIM
QSVFDVDGKTQQVTTSIWYRQIWTDEFLVWDPEEFDGITEISLSSDAIWVPDLTISEFVD
VGESPAIPYVYVNSLGMVKNNKPIQVVSACDLELYAFPFDKQNCTLTFRSWLHSVSEVNL
TLWRSAEEIANDQKSFMDDGEWELMSVPSRYWQLRLDDRDYAHIQFNVLIRRRPLLYVVS
LLIPSIFLMVVNVISFYLPPNSGTRITFKTSILLGYTVFRVNLMDEMPATAIRTPLIGVF
FAVCMALLVLNLAISIFVVKLLHHNEKEVKEMSVSACLLDKYGSSSQTFLESNFTSVKTL
GDVDQCGGYEFDLAPEELLSLSEPQESAPRLESLLQEVVALRLYLQEGVSDDSAQADWVA
LCCKVDLLLFRVYLLILVVYTSTLLLLWASWSSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagtcttctggctcctactgagctcagcccctctggctgaactggtagcagat
aaacccaagaggtctgctctgaaccagctcaccaggaccctcctgcgtaaaaacgactgt
ggagtcagacctgttcagaactggaccagtcccatactcatccacacagacctcataatg
cagtctgtctttgatgtggatggaaagacacagcaagtaaccacaagcatttggtaccgg
cagatatggactgatgagttcctggtatgggaccccgaggagtttgacgggatcactgag
atctccctgtcctcagacgctatatgggtgcccgatctcaccatcagtgaatttgtggat
gtaggggagtcccctgccatcccctatgtgtatgtcaactcattgggcatggtgaaaaac
aacaagcctatccaggtggtgtctgcgtgtgacttggagttgtacgccttccccttcgac
aagcagaactgcactctgaccttccgcagctggcttcactcagtgagtgaggtgaacctg
actctgtggaggagtgcggaggagatcgccaatgatcagaagtcgtttatggacgatggc
gagtgggagctgatgtctgtgccctcccgctattggcagctccgcctggacgacagagac
tatgcccacatccagttcaatgtgttgatccgccggcgccccctgctgtatgtggtgagt
ctgctcatcccaagcatcttcctcatggtggtgaacgtcatcagcttctacctgccgccc
aacagtggcacgcgcatcaccttcaagaccagtatcctcctgggctacactgtctttagg
gtcaacctgatggatgagatgcctgccaccgccatcagaacaccactcataggtgtgttc
tttgcggtgtgcatggcgctgctggtgctgaatctagccatctccatatttgtagtgaag
ctcctccaccacaatgagaaggaggtcaaggagatgtcagtgtccgcctgcctcctcgat
aagtacggctcgtccagtcagaccttcctcgagagcaacttcacttctgtcaaaacactg
ggcgatgtggatcagtgtgggggctatgagtttgacctggctccagaggaactgctgtcc
ctgagcgagccccaggagagtgctcctcggctggagagtcttctccaggaggtggtggcc
ctgaggctctacctgcaggagggagtgagtgacgactcagcccaggctgactgggtggcc
ctctgctgtaaggtggacctcctcctgttccgagtctacctgctaatcctggtcgtctac
accagcactctgctgctactgtgggccagctggagctctgcatga
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