Coregonus clupeaformis (lake whitefish): 121580261
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Entry
121580261 CDS
T08357
Name
(RefSeq) vascular endothelial growth factor C-like
KO
K05449
vascular endothelial growth factor C/D
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121580261
04020 Calcium signaling pathway
121580261
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121580261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121580261
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121580261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
121580261
NCBI-ProteinID:
XP_041751248
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Position
13:47561592..47569674
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AA seq
396 aa
AA seq
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MWMLSLVIWILNVTNLTHGYDYEEYPGEEDTKAPLIGEGLSGLDTVSNVDELVELLYPEY
SLVQHCLRRKAPRTTSPPLHAEDDIWAWGKPRELALYKSDSTIEVILEEIQRTMCTPREV
CLEVSKEYPESTSHFYMPRCVSVHRCGGCCPHEGLYCTNTSHIYINKTLVELSHRDRSVV
MVAFVNHTSCECLSKRPLHSVIRRAAAAHLTVCSPPDVPCSTGLVWDPTSCLCVPMDTSA
FSERELEPLESALLELCGPNKVLDEDSCECVCQNGLTEASCGPGWRLDQESCECLCEDQP
SPGTCPPNQRWDPELCGCVCRAECPRSQPLNPETCLCQCRESPHTCLLQGKRFNAHNCSC
YRLPCRKPHKNCPTGFYYSHYVCQCIPNHMRSEEWN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttatctttagtcatatggattctcaatgtcaccaatctcactcatggatat
gactatgaggagtacccaggtgaggaggacacaaaggccccactgattggggagggcctc
agtggtttggacacagtgtccaatgtggacgagctggtggagctgctgtacccagagtac
agtctggtgcagcactgcctacgtaggaaagccccgcgcaccacctcccctcctctccat
gctgaagacgatatctgggcctggggcaagcccagggagctggcactgtacaagtctgac
agtaccattgaagtcattctggaggagatccagcgtaccatgtgtactcctcgggaggta
tgtctggaggtgtctaaggagtacccagagagcaccagtcatttctacatgcctcgctgt
gtgtctgtgcaccgatgcgggggctgctgtccccacgagggactgtactgcaccaacacc
agccacatctacatcaacaagacgctggtggagttgtctcaccgtgaccgctctgtggtg
atggtggcgttcgtcaaccacacgtcctgtgagtgtctgtccaagaggcccctgcactcc
gtcatcaggagggccgctgcagcccacctcaccgtgtgttccccgccagatgttccctgt
agtacaggactggtctgggaccccaccagctgcctgtgtgttcccatggacacaagcgcc
ttctcagagagagagctagagcccctggagtcagccttgctggagctgtgtggccccaac
aaagtcctggatgaggacagctgtgagtgtgtgtgtcagaacggtctgacggaggccagc
tgtgggccgggctggcgtctagaccaggagtcctgtgagtgtctctgtgaggaccagcct
tccccggggacttgcccacccaaccaacgctgggacccagagctgtgtggctgtgtgtgc
cgggcagagtgcccccgtagccagcctctcaacccagagacgtgcctgtgccagtgcagg
gagagccctcatacctgcctgctgcagggtaagaggttcaacgcacacaactgcagctgt
taccggctgccctgcagaaagccacacaagaactgtccaactggcttctactacagccac
tacgtctgccagtgcatacccaaccacatgaggtcagaggagtggaactga
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