Coregonus clupeaformis (lake whitefish): 121580269
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Entry
121580269 CDS
T08357
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04218
Cellular senescence
cclu04310
Wnt signaling pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121580269 (nfatc3a)
04310 Wnt signaling pathway
121580269 (nfatc3a)
04020 Calcium signaling pathway
121580269 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121580269 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
121580269 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121580269 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580269 (nfatc3a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121580269 (nfatc3a)
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
121580269
NCBI-ProteinID:
XP_041751264
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Position
15
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AA seq
1131 aa
AA seq
DB search
MTTANCTGNEELDFRLIFGEDGQQQSLGPADLEPDDNTSFYILNVGQQVVVNNQSMGQSR
HGSMQSHSHSQVINSSPHQRLQSHKVYDPNYEVQDNVNKNKYSPAGGGGGPPKAFECPSI
QITSISPSCQQEMDANEDDLRGNDGDYHHGDRPLSRDHLYLPLDHSYRDSTLSPSPCSSL
SSRSWFSDASSCESFSHVYDDVDSELNEAAARFTLGSPRTSPGCSPQPGVLEEGQWAGQQ
HHHPAFHHSHHSSHSLSPRASPCHSPRTSVTDENWLSPRPPSRPSSRPTSPCGKRRHSSA
DICYPVGSVSPHHSPIPTPEPSPRGSVTEDTWIASPSMGMSPFQCCPSEADIPSKTRKTS
QDRTGSMGGKGDLGLDDSGNGSPLMDSPSEDTLHSLKKDGPGEQFLSVPSHFTWNKPKPG
HTPIFRTSSLPPLDWPLPHQFGQYELKIEVHPKAHHRAHYETEGSRGAIKASSGGHPVVK
LMGYNEKPVNLQMFIGTADDRYLRPHAFYQMHRITGKTVATASQEIIISSTKVLEIPLLP
ENNMSASSPPYLSCSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQTNGKV
LSLQAASIPVECSQRSAQELPQVEKASLTSSLVSGGEEIVITGSNFFPESKVIFLEKGPD
GRPQWEVEAKIIREKSQGSNIVVEVPPYHSKTVTSAVQVQFYVCNGKRKRSQSQRFTYLS
VLVKQEHNREEMEGPPAVPPMPGMSMPLAHAASLVCNTHTQLPSPEQGHPPDGLLSSSPR
GLAAGPGPSLHTLQPACPLMGSPSFQHLPHLQGRGLHMPADCHMTFHPGPAPPNRPSYQH
HPMQQSHSHPGHVSNLNHNLPYNGQSSLPMNMNTGAPQGYERMPYHQQQSDPGASHPMGL
GMVYHSSPSTSAQQASSPHSPIPTAPHSQPMTHSSHSAPHLLSMGYHCSPNPSQVPSPTH
PNHPMGQPSPTHPNHPMQPSPQLQRAMGGYHPTSQRSASCPTTSSAPPAHIVPSPHSGPS
SPQLHSLPYQSPTSPSPTGSPLGHPAHSPQASSPVMSSLSPGGPGPLVQQHPLAPQQGPF
PTEGESMNIKQEPEESEPTFRSIGLQDITLDDVNEIIGRDMSQSPGGGAQS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaaactgcactggtaatgaggagctggacttcaggctgatcttcggagag
gacggccaacagcagtcgctaggccccgcagatctggagcctgatgacaatacgtcgttc
tacatcctcaatgtgggccagcaggttgtggtcaacaaccagtctatgggccagtcacgc
catggcagcatgcagtctcactcccactcccaggtcatcaactcctccccccatcagcgc
ctgcagtcccacaaggtgtacgaccccaactatgaggtccaggacaatgtcaacaaaaac
aaatacagccctgcaggtgggggtggggggcctcccaaagcctttgagtgtcctagcatc
cagatcacctctatctcccccagctgtcagcaggagatggacgctaacgaggatgatctt
agaggtaatgatggggactaccaccacggggaccggcccctgtccagggaccacctgtac
ttgcccttagaccactcataccgggactcaactctcagcccgtccccctgcagctccctg
tcctccaggagctggttctcagacgcctcatcctgcgagtccttctcccacgtgtacgat
gacgtggactctgagctgaacgaagcggccgcaaggtttaccctggggtctccccgcaca
tcccctggctgctctcctcaacctggggtcctggaggagggtcagtgggctgggcagcag
caccaccatcctgcctttcaccactcccaccactcctcccactccctgtccccccgcgcc
tccccctgccactccccacgcacctccgtcaccgatgagaactggctgagcccccggccg
ccgtcccgcccctcctcacgccccacctcaccctgtgggaagagacgccactccagcgca
gacatctgctacccggtgggctctgtgtccccacaccactccccgatccccacccccgag
ccatccccaaggggcagtgtgacagaggacacctggatagcaagcccctccatgggcatg
tccccgttccagtgctgcccttccgaggcagacatcccctcaaagactagaaagacgtcc
caggatcggacaggctccatggggggcaagggggacctgggcctggatgactctgggaac
gggtcccccctcatggactctccctcggaggacaccctgcactccctgaagaaggacggg
ccaggggaacagtttctctcagtgccctcacacttcacatggaacaaacccaaaccagga
cacacacccatcttcaggacctcctccctgccccccctggactggcccctgccccaccag
tttggccagtacgagctgaagatcgaggtgcaccccaaggcccaccaccgagcgcactac
gagacagaaggaagcagaggggcgatcaaagcctcatcgggcggtcaccctgttgtcaag
ctgatgggctacaacgagaagcctgtcaacctacagatgttcatcggcacggcagacgac
cgctacctcagacctcacgccttctaccagatgcatcggattactgggaaaacggtggcc
actgccagccaggagatcatcatctccagcaccaaagttctcgaaattcctctgcttccc
gaaaacaatatgtccgccagctcccctccctatctctcttgcagtattgactgtgctggc
atcctgaagctgcggaactcggacattgagctgcggaagggggagacggatattgggcgg
aagaacacgcgtgtgcgagtggtgtttcgtgttcacatcccccagaccaatgggaaggtt
ctctctctacaggctgcatccatccccgtagagtgttcccagcgttcggcccaggagctt
ccccaggtagagaaggccagtctgaccagctctctggtcagcgggggagaggagatagtc
atcacaggatccaacttcttccccgaatcaaaggtcatattcctggagaagggccctgat
ggaagaccacagtgggaagtggaggcgaaaatcatccgggagaaaagtcaaggatcgaac
atcgtggttgaggtccctccctaccacagtaagaccgtgacctcggctgttcaggtgcag
ttctacgtgtgcaacgggaaacggaaaaggagccaatcacaacgcttcacttacctgtca
gtcctggtgaagcaggagcataacagagaagagatggaagggccccctgctgtgcccccc
atgcccggtatgtccatgcccctggcccatgctgccagcctggtctgcaatacccacacc
cagctgccttcccctgagcagggccacccgccggacggccttctgtccagctctccccgg
ggcctggctgcgggccccggccccagcctccatactctgcagcctgcctgccccctcatg
ggctccccctccttccagcacctgcctcacctccagggcagaggcctccacatgcctgct
gactgccacatgacgttccatccgggcccagctcctcccaacaggccctcctaccaacac
catcctatgcagcagagtcacagccatcccggccacgtaagcaacctaaatcacaacctg
ccctacaacggccagtccagcctgcctatgaacatgaacactggggctccgcagggctat
gagaggatgccttaccaccagcagcagtctgaccccggggcctctcaccccatggggctg
ggtatggtgtaccactcctccccatccacctccgcccagcaggcctccagcccccacagc
cccatccccactgccccccacagccagcccatgacccactcctcccactctgctcctcac
ctgctctccatgggctaccactgttcccccaaccccagccaggtgccctcgcccacccac
cccaaccaccccatgggccagccctcacccacccaccctaaccatccaatgcagccctcc
ccccagctgcagagagctatggggggctaccaccccaccagccagaggtctgcctcctgt
cccactacctccagtgcccctccagcccacattgtgccctcgccccactccgggccatcc
tccccccagctccactccctgccctaccagtcacccacctccccctcccccaccggcagc
cctctgggccacccagcacacagtccccaggccagcagccctgtcatgtccagcctgtcc
ccagggggaccggggcccctcgtgcagcagcaccctctggccccccagcagggccccttc
cctacggagggggagagcatgaacatcaagcaggagccggaggagagcgagcccaccttc
agatccatcggcctgcaggacatcacactggacgacgtgaatgagatcatcggcagagac
atgtcccagtcccctggcggcggtgcccagtcgtag
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