Coregonus clupeaformis (lake whitefish): 121580271
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Entry
121580271 CDS
T08357
Symbol
gabarapa
Name
(RefSeq) GABA(A) receptor-associated protein a
KO
K08341
GABA(A) receptor-associated protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04068
FoxO signaling pathway
cclu04136
Autophagy - other
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121580271 (gabarapa)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121580271 (gabarapa)
04136 Autophagy - other
121580271 (gabarapa)
04137 Mitophagy - animal
121580271 (gabarapa)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121580271 (gabarapa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121580271 (gabarapa)
04121 Ubiquitin system [BR:
cclu04121
]
121580271 (gabarapa)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121580271 (gabarapa)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121580271 (gabarapa)
Ubiquitin system [BR:
cclu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
121580271 (gabarapa)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121580271 (gabarapa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
NRG4_TM
Motif
Other DBs
NCBI-GeneID:
121580271
NCBI-ProteinID:
XP_041751262
LinkDB
All DBs
Position
13:complement(49039913..49041363)
Genome browser
AA seq
122 aa
AA seq
DB search
MKFMYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYGDSQT
EV
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcatgtataaagaggagcacccatttgagaagagaagatcggagggggaaaaa
atcaggaagaagtacccagatagagtgccagtgatagtggagaaagcccccaaagccaga
ataggtgatttggacaagaagaaatatcttgtaccctctgatcttacagtgggacagttc
tacttcctgatccggaagaggattcacctgcgggcagaggatgcccttttcttctttgtc
aacaatgtcattcctcccacctcagccaccatgggactcctttaccaggaacaccacgaa
gaggacttctttctgtacatagcctacagtgatgagagtgtctacggagacagccaaaca
gaagtctag
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