Coregonus clupeaformis (lake whitefish): 121580282
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Entry
121580282 CDS
T08357
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121580282
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121580282
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
121580282
NCBI-ProteinID:
XP_041751275
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Position
13:54100147..54107559
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AA seq
777 aa
AA seq
DB search
MRRHSLSSRPPRPAGHRHCDSCFSRRCKAPVEISVSCVLIPCRLLCGALFHLCKEEEHAL
LCPNEKVPCLNAAFGCPIIMPRSWQAGHLQVCPASVVCCSMEWIRWPADEAYANTHPDVH
AHTHTLHENLLKEQKAGEQLDLAMALDDQRHLYARMKMKTLYPEMIVKEEGEEEEKKEEK
KKKKTEDWAAVRLTNGASTLRTAADDGCSEERPYDILSGIPETAVTDLSDFSLEEEEGDV
AAEEPGGNISSDRYNRYERMFNMDKGGCNLDIKKSRGREGKEWNQWMELEEQSCREKKER
RDAEAEGEGLMGAPQAPGASGRPRGTEANANATGTTGMAPWQDGVLQRMAKEVTPQEFNM
YLVHHGRMLLTFGQMDACTPREKDFVYGNIEPIPVQTLYSFKVPVSYREKQRSIHYYDAS
ARAESTWVCVDTSDLGALKESWWTDEAESTLLGYAEREVMGHQISELRGQDGLYVDMGMQ
THSFRTAPFRRDTTLADLTRDKPLKLRLQLQADSTSSRHNKASSAFTFLCGHSFQRREFP
KHFRNVHTDIQTCASGWFEQRCPLAYLGCTYSQRRLEPFRQPATVTYNQELSIFNLRPTV
PASLGEGPEPPKPSKSQSAPEPVSTPRRWRSKGEGDCDSLSALPSEVLCHIASFLDSLSL
SQLALVSRLMREVCSSLLQDRGMVSFLWEKKTYKSGVAKWKAKTVWEFSHLFSTVDLWRF
IDNVPSMSEHLKVCSYYQTWVPPQPVALPSMSHLRGGTQEQDNQQRQSLVTQFMGNR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtcattccctttcctctcgccccccccgtcctgccggtcaccgccactgtgac
agctgcttcagccggcggtgcaaggcccctgtggagatctctgtgtcttgtgtgctcatc
ccctgtcgccttttgtgtggagccctgttccacctgtgcaaagaggaggagcatgcgctg
ctctgccccaatgagaaggtgccatgccttaacgccgccttcggctgtccaatcatcatg
ccccgttcctggcaggcgggccacctgcaggtctgtcccgccagtgtggtgtgctgctca
atggaatggatccgctggccagccgatgaagcctacgcaaacacacaccccgacgtccac
gcacacacacacaccctgcatgagaacctgctgaaggagcagaaggcaggagaacagctg
gacctggccatggccctggatgatcagagacacctgtacgctcgtatgaagatgaagact
ctctacccagagatgatagtgaaggaggagggagaggaagaggagaagaaagaagagaag
aaaaagaagaagacagaagactgggctgcagtgcgtctaactaatggggcctccaccctc
cgtacggctgctgatgatgggtgtagtgaagagaggccatatgatatcctatctggcatt
ccagaaacagcagtgacagacctttcagacttttctttggaggaggaggagggagatgtg
gctgcggaggaaccagggggaaacatcagctctgacagatacaacaggtatgaaaggatg
ttcaatatggataaaggaggctgtaacctggacatcaaaaagagccggggtagagaaggg
aaggagtggaaccagtggatggagttggaggagcagtcgtgcagagagaagaaggagaga
agagatgcagaggcagaaggagaagggttgatgggagctccgcaagctccaggagcttca
gggagaccaagggggaccgaggccaatgctaacgcaacagggactacaggtatggcccca
tggcaggacggggtcctgcagcgcatggccaaggaggtcaccccacaggaattcaacatg
tacctggtgcaccacggacgcatgctgctcacctttggccagatggatgcctgcacacca
cgggagaaagactttgtctacggaaacatagagcccatccctgttcagacactgtactcc
ttcaaggttcctgtcagctaccgagagaagcagcgtagtatccactactatgacgcatcc
gcccgtgctgagagtacctgggtctgtgtggatacgtctgacctgggggcattaaaggag
tcctggtggacggacgaggctgagagcacactactgggatacgcagagagagaggtcatg
gggcatcagatcagtgagctgcgtggacaggatgggctttatgtggacatggggatgcag
acccactccttcaggacggcgccgttcagacgagacacgacgttagcagacctgacaagg
gacaagcctctgaagctccgcctccagctgcaggcagacagcacctccagccgacacaac
aaggctagctccgccttcaccttcctctgtggacactccttccaacggagggaattcccc
aaacacttcaggaacgtgcacacagacattcagacgtgtgctagtggctggtttgagcag
aggtgtcccctggcctacctgggctgcacctacagccagagaaggttagagcctttcaga
caacctgccaccgtcacctacaaccaggaactgagcatcttcaacctccgacccaccgtc
ccagcctctctaggggagggaccagagccccccaaaccctccaagtcccagtctgctcca
gaacctgtctcaacccccaggaggtggcggtcgaagggagaaggggactgcgattctctg
agtgctttgccatccgaggtgctgtgccacattgccagcttcctggacagtctgtccctg
tcccaactggccctggtgtcccgcctcatgagagaggtgtgttcctctctgctgcaggac
agggggatggtgtccttcctctgggaaaagaagacctacaagtccggtgtggccaaatgg
aaggccaaaactgtgtgggagttcagtcatctgttctctacagtggatttgtggcgtttt
atagacaacgtgccgtccatgtcggagcacctgaaggtttgttcgtactaccagacctgg
gtaccaccccagccggtggccctgcccagcatgagtcacctacgggggggaacacaggag
caggacaaccagcagagacagagcctggttactcagttcatgggcaacagatag
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