Coregonus clupeaformis (lake whitefish): 121580418
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Entry
121580418 CDS
T08357
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580418 (irx6a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121580418 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
121580418
NCBI-ProteinID:
XP_041751352
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MLTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTSGTQTPATFCCPSYE
NRLLASTRTELNAALGMYSSPYAAAAAASQNYASYFPYSAEPSAAIYSSLNPQYEIKDGT
GTLHSGITQPATYFPYDHSLGQYQYDRYGTMDFNGSARRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKDDLDKSDQ
DCVTKDSSECKDEKDLHLSDLEDMEDEDCDKLDTDCEKMAPRGPEEQQDLHRAMSSGGVG
PGGPPKRDCSLELSLSLPNSFHHSFPCGIKSLPALPSLPALPSDFLDPLVTSKPPSTTTI
PTGPHTVSLSHFEVSDRDKPRIWSLARTAATGVILSSAHHGASELRTGSMLGDCQLQGTR
LPVNGTGQCGPLRGLQDPTNISNAENPFQEGPLLHSKVYSAGSYNHKALQLHCSSYPALS
DSCQYSTIEGFSSGKAETEPSELSDMCVTLQDDKVTAFRPVMKRLMDTQSLHSGPFI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaagaagcagctatgtctttttctcaatttggatatccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacgagcggtacccagactcctgctaccttctgctgcccttcctacgag
aaccggctcctggccagcacacggacggagctcaacgcggcactagggatgtatagctca
ccctacgcagccgcggccgccgccagccagaactatgccagctacttcccctacagcgcc
gagccctccgctgctatctactcatctctgaatccacagtacgaaattaaggatggcaca
ggcactctgcattctggcataactcaacctgccacctactttccttatgaccactcactg
ggccagtaccaatatgacaggtatgggactatggacttcaacgggtcagccaggaggaag
aatgccacacgtgagaccaccagtaccctgaagacatggctgtacgagcacaggaaaaac
ccctaccccaccaagggggagaagatcatgctggccatcatcaccaaaatgaccctcacc
caagtgtccacctggttcgccaacgccaggaggaggctaaagaaggagaataagatgacc
tggtcaccaaagaataaggccggggacgacaggaaggacgacctggataaaagtgaccag
gactgtgtcaccaaagattccagtgagtgtaaagatgagaaagaccttcatctgagtgac
ctggaggacatggaagatgaggactgtgacaagctggacactgactgtgagaagatggcc
cccaggggccctgaggagcagcaggacctccacagggccatgtccagtggtggtgttggc
cctggaggccctccaaaaagagactgcagcttggagctctccctttccctgcccaacagc
ttccatcactccttcccatgtggtatcaagagcctacccgccctgccctctctacccgcc
ctgccatcggacttccttgatccactggtgacgtctaagcccccctccaccaccaccatc
cccacgggccctcacactgtgtccctgtcacacttcgaggtgtcggaccgggacaagccg
aggatctggtctctggcgcgtacagcggccacgggggtcatcctgagctctgctcaccac
ggggcctcagagctccggacagggagcatgctgggagactgccagctacaggggaccagg
ctaccagtgaatggtaccggacagtgtgggcccctcaggggcctccaagatcctactaac
atatccaatgctgagaaccctttccaggagggccccttgttgcactctaaggtctatagt
gcgggcagctacaaccacaaggccctccaactgcactgttcctcctaccctgcgctttca
gactcatgtcagtactccactatcgaagggttctcgagtgggaaggcagagacagagccc
tcggaactcagtgacatgtgtgtgaccctgcaagatgacaaggtcactgccttcagacct
gtgatgaagaggttgatggacacgcagtcattacacagtgggccttttatttag
DBGET
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