Coregonus clupeaformis (lake whitefish): 121580454
Help
Entry
121580454 CDS
T08357
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121580454 (irx5a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121580454 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
121580454
NCBI-ProteinID:
XP_041751356
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPTEKGDSTDTESDHKLLNPGDIACDRFKEENHGKEM
DPLLSDSELKDQGERTELLPESAKPTTSSPSAVSRGGTELVAQDKPSEMGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGPQGHGMGHSTVISTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDICKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcctca
tctggctcggcttttgctccttatgccggatctaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcgggggcggccgccacttttgcttcatac
gtgagttctccctatgaccacacgacgggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgccaccgccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggcgagaaaatcatgctggccatcatcaccaaaatgaccctcacccaagtgtccacc
tggttcgccaatgccaggaggaggctaaagaaggagaacaagatgacctggactccacga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgacagaaaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagcttgcgacagatttaaagaggagaatcatggcaaagaaatg
gatccccttctgagcgactcggaattaaaagaccaaggggagcggacagagttactgccc
gagtctgctaaacccaccacctcgtctccatccgccgtgtctcgtggaggaaccgagctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgggcacagtaaacagcaacgtt
acatctgttattcactcgtccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagcagtgacgggccgcagggccatgggatg
ggtcacagcacagtgatcagcaccaatgcagcgtcaccatcacggtcctccccccagtgt
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagcaatcacggctcgggc
acgggctccaccgcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatatttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
DBGET
integrated database retrieval system
