Coregonus clupeaformis (lake whitefish): 121580517
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Entry
121580517 CDS
T08357
Name
(RefSeq) M-protein, striated muscle
KO
K24495
myomesin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121580517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121580517
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121580517
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
ig
Ig_2
V-set
C2-set_2
Ig_CD22
B-CoV_A_NSP1
C2-set_3
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
121580517
NCBI-ProteinID:
XP_045080801
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Position
14:complement(5079..176717)
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AA seq
1231 aa
AA seq
DB search
MDPDTNEVIGYIVPVFRTSHEFARGLVEVQEEVKEEGVGHVAMRNLFSREASSMETVTVE
KKSRKRHIRESADRLELSKKVEERAEFRKKQNSDSLTHPPEFIVRPRGQTVWEGKTVKLH
CTVTGWPKPRIAWYKNNVIIDEKANPDKYAAESNYNMHSLEIKSCDFLDTAQYHVSALNI
KGESSSVATVVIKRFQEGDKVGPLDAKPHGFCSEHGVTFETAIIDSFEVAFGREGETLSL
GCTVIVYPTVKRYQPDVLWYRDGKALSESKWVHSHWSGEKATLTLVHLNKEDEGLYTLRV
NTKSGFQTHSAYVFVRDEEVELEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSSSILGY
FIDRCEVGHHHWAQCNDTPVKYARFPVTGLIEGRSYTFRVRAINRAGVSRPSRASDPVTA
IDPHDRARHRAGPSAPFTGMIKFTEEDATVGVVPGEPTDLVVTEATKNYVVLAWTPPAQR
GHEGVMYLVEKCVAGSECWQRANTGMPVKSPRFALFDLAEGKRYSFRVRCCNSAGMSEAS
SATGDITVGDMLDLPAAPGPAVATRNTDTSVVVSWGASKDVKHLVGYYIDYTVVGSDVWT
PANNKPVKGTRFVCHGLNTGESCVFRVKAVNAAGYSHSSLESEAVVVKAGIAVPGIPSGV
HLVEAARDYMVLAWREPVVTGGADIRGYFVDYRTVKGGVGGQWHELNPKAVTCTSYKAEN
LKENSFYQFQVRAFNMAGVSEASLPSAALECKEWTIAKPGVPHGLRVLEVRDNSLVLLWE
TPTFDGRTPVNGFYVDIKEAMAGEVWKGVHEKAIKLKYMKVNGLIAGRSYVFRLRAQNLA
GVGKTSAVLGPVLALTMPGTHEIVLDVDDDGVISMIFECSDMAEGSKFIWSKNYKALTDT
SRLTIVTEGGKSRVVFNDPSLEDLGIFSCEVTNTDGVSASYTLTEAGLKRLLDISHEHKF
PIIPFKTQMAMDLLEKGRVRFWTQVEKFTAGCHVEYVFNDAIVENGEKYTMNFDKNSGII
EMFMDSLAVTDEGTFTFNLVDGKAKGSTSLVLIGEEFRELQKKSEFEHAEWIRRQGPHFV
DYLGFEVTPECNVLLKATIGNIKPETEIRWYKDGLEIEEDDADYKKIEMKDVLLTFNIGK
LSKKDAGVYEVKLKDARGKDKSMFNLTEAGYQAVLNELFRVIAKSSTDISVLSTEHGIVL
YSFITYHMEDLQVGWLHKDAKIAHLTESSVV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgacaccaatgaggtcattggatacatagttcctgtcttcaggaccagccat
gagtttgccaggggcctagtggaggtccaggaagaagtgaaggaggagggggtggggcat
gttgccatgaggaacctgttctcccgggaagccagctccatggagacagttaccgtggag
aagaagagcaggaagaggcacattagagagtcagctgaccgcctggagctcagcaagaag
gttgaggagagagcagagttccgtaagaagcagaacagtgacagcctgacccatcctcct
gagttcatagttcgtccccgaggacagactgtctgggagggcaagactgtcaagctgcac
tgcaccgtgactggatggcctaaaccacgcattgcatggtataagaacaatgtgattata
gatgagaaggccaatcctgacaagtacgcagcagagagcaactacaacatgcactctctg
gagatcaagagctgtgacttcctggacacggctcagtaccatgtgtctgctctcaacata
aagggagagagctcctccgttgccaccgtggtcatcaagaggttccaggagggagataaa
gtgggacctcttgatgctaaaccacatgggttctgctcggagcatggcgtgacctttgag
acagccatcatagactcgtttgaggtggcgttcggccgggagggagagactctgagtctg
ggctgcaccgtcatcgtctacccaaccgttaaacgctaccagcctgatgtcctctggtac
agagatggcaaggccctgtcagagtctaagtgggtccacagccactggagtggagagaaa
gccacactgacactggtccatcttaacaaggaggatgaaggactctacaccctgagagtt
aacaccaagtctggcttccagacccactccgcttacgtcttcgtcagagatgaagaggtg
gagttggaaggtgttcccgtggcgccccttgacgtgcgttgccatgacgccaataaggac
tacgttgtggtgacatggaaacagccggcggtggagggaagcagctccatcctgggatac
ttcattgataggtgtgaggtcggccaccaccactgggctcagtgtaacgacacccctgtg
aagtacgcccgtttcccagtaacggggctgattgaggggaggagctacaccttccgggtc
agagccatcaaccgggctggggtcagccgaccttctagagcctctgatcctgttacggcc
atagacccccacgacagggctcgccatcgagctggtccctctgctcccttcaccggaatg
atcaagttcactgaggaagacgctacagtgggcgtggtcccaggtgagcccaccgacctg
gtggttaccgaggcaacgaagaactacgtggttctggcctggactcctcccgctcagaga
ggtcatgagggggttatgtacctcgtagagaagtgtgttgcgggcagtgagtgctggcag
agggccaacacagggatgcccgtcaagtctcctcgcttcgccctgtttgatctggcagag
ggaaagcgctacagcttcagagtccgctgctgcaactctgctgggatgtctgaggcctcc
tctgctactggagatatcactgtaggagatatgctggacctgcctgcggcccccggccca
gccgtagccactaggaacacagatacatcagttgttgtttcctggggggcgtccaaggat
gtaaaacacctggtgggatattacatcgactatactgtggtgggcagtgatgtctggacc
cctgcaaacaacaagcctgttaaaggaaccaggtttgtgtgccacggtctgaacacagga
gagtcgtgtgtgttccgtgtgaaggcggtgaatgcagcaggatacagtcacagctctttg
gagtcagaggccgtggtcgtcaaggctggcatcgccgttcctggtatccccagtggagtc
cacctggtggaggcagctcgtgactacatggtgttagcgtggagggagccggtggtgacc
gggggagctgacatcagaggatactttgtggactacaggacagtaaagggaggagtggga
ggacagtggcatgaacttaaccccaaggctgtcacctgtacttcctataaggcagagaac
ctgaaggagaactcgttctaccagttccaggtgcgagccttcaacatggccggtgtcagc
gaggcctctctgcccagcgcagctctggagtgtaaagaatggaccatcgctaagccaggt
gttccccatggtctccgtgtgttggaggtgcgtgacaattccctggtgttgctgtgggaa
actcctaccttcgatggccgaactcctgtcaacggcttctatgtggacatcaaggaggcc
atggcaggggaggtctggaagggagtacatgagaaggccatcaagctgaagtacatgaag
gtcaatggtctgattgcaggcaggtcctatgtgttcaggctgcgtgctcagaacctggct
ggagttggaaagacttctgctgtgttaggacctgttctggctctaaccatgcctggtaca
catgagatagtactcgatgtggatgatgatggtgtgatctccatgatctttgagtgttct
gatatggccgaggggtcaaagttcatctggtctaagaactataaggctctgacagacacc
tccagactcactatcgtcacagaggggggaaagtccagagtggtctttaatgatccctct
ttggaggaccttggtatcttctcctgtgaggtcaccaacactgatggagtctcagccagc
tacactcttacagaggctggtctgaagcgtctcctggatatcagccacgagcacaagttc
cccatcattcccttcaagactcagatggccatggatctgctggagaagggccgtgtgagg
ttctggacacaggttgagaagttcaccgctggctgccatgtagagtatgtcttcaacgat
gcgatcgtagagaacggagagaaatacacaatgaactttgacaagaactccggtatcatt
gagatgttcatggactctctcgcggtcaccgacgagggaacattcacctttaaccttgtg
gacgggaaggccaaggggtccaccagcctggtgctgattggagaagagttcagagagctc
cagaaaaagtctgagtttgaacatgctgaatggatcagaagacaaggtcctcacttcgtg
gactaccttggtttcgaagtcaccccagaatgcaacgtgctgctgaaggccacgatagga
aacatcaagccagagacagagatcagatggtacaaagacggattggagattgaagaggat
gatgctgattacaagaagatcgagatgaaggacgtactgttgaccttcaacatcggaaag
ttgtccaaaaaggatgcaggtgtgtacgaggtgaagctaaaggatgccagaggaaaagat
aagagcatgttcaacctgactgaagcaggttaccaagctgtgctgaacgagctgttcagg
gtgattgccaagtcgtctacggacatcagtgtgctgagtacagaacatggtatcgtcctc
tactccttcatcacatatcacatggaggacctccaagtgggctggctgcacaaggatgct
aagattgcccacctgacagagtccagtgtggtgtga
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