Coregonus clupeaformis (lake whitefish): 121580529 Help Entry 121580529         CDS       T08357                                  Name (RefSeq) collagen alpha-2(VI) chain-like   KO K06238   collagen type VI alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121580529  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121580529   09142 Cell motility    04820 Cytoskeleton in muscle cells     121580529  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121580529    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121580529 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121580529 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121580529  Hyaluronan   Extracellular matrix or blood plasma proteins    121580529 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 Motif Other DBs NCBI-GeneID:  121580529 NCBI-ProteinID:  XP_041751387 LinkDB All DBs Position Unknown AA seq 1014 aa AA seqDB search MMMMRSEFITLCFLFGATAHAQAVPECNRKHECPIDVYFAIDTSETIALQEPPPGSLVES IKIFTERFAERLEDADYKGLVQIRWQLGGLHFSQRQQVFSRIQAKDAFIQGVRGVRYLGK GTYIDCALANMTQEITRSPSDPGALRFAVIITDGHVTGNPCGGVKVTAERARDEGIRMFV VAATKNVDETGLREIANSPANVYRRDFLAVDLSGNNAVIQQDTIDRIIKTMTHLAYQECY QVKCLETEGPPGPKGHSGHKGVKGDNGDPGPKGERGRQGDPGIEGHIGQPGVKGEIGLKG EKGEIGAEGMKGVVGLAGRNGTDGQKGKIGRIGAPGCKGDPGDRGPDGHPGDVGDGGLPG TDGEKGDSGRPGRAGPLGPVGDAGPKGERGSPGSPGFPGAKGTPGTVGGPGDKGELGRRG DFGLKGDQGPDGVKGDRGEAGPEGLRGLPGEVGNKGTKGDNGLPGPRGPPGSSGEAGKNG TRGDPGDAGPRGDPGQPGPKGDVGRAGFSYPGPRGPTGDRGEKGGPGPRGGRGDCGPKGG PGGKGTPGEEGEPGPQGEPGLRGPRGVGGRDGDQGPEGDPGLTECDVMNYIRETCGCCDC EKRCGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSMAKDPNSETGTRVGVVQYSH SGTFQAIRLNDSKIDSLSAFKDAVKRLEWIAGGTWTPSALKYAYDHLIKDSRRAKANVTV VVITDGRFDPRDDDSLLTYLCSDPSVDVSAIGIGDMFDQIEENESLKSIACQRDGRVLGM RRFADLVAEEFIDKIEAVLCPDPVIVCPDLPCKTEPAVASCVQRPVDLVFMLDGSERMGV ENHRRAKEFIENVARRLTLANGESDDRNARVALLQYGGQSEQRVEFSLTHNLTVIADSLA GMSYMDSASSLGSAIIHAVNNLVMSQGTRLARRNAELSFVFITDGITAGNSLEEGVSAMR RAEGIPTVIAMGTDTDQEVLRKVALGDTLAIFRGEDYATLGKPTFFERFIRWVC NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atgatgatgatgaggtcagagttcatcacgctgtgcttcctgtttggagccacagcacac gcccaggctgtcccagaatgcaacaggaaacatgagtgtcctatagacgtgtactttgcg atcgacacgtctgagaccatcgccctgcaagaacctccccctggatcactggtggagagc atcaagatatttacagagcgttttgcagagcgtctggaggatgcagactataaaggactg gtccagatcagatggcagttaggaggactacacttctcccagagacaacaggtcttcagc cgtatacaggccaaggacgctttcatacagggggtgaggggtgtccggtatcttggtaag ggaacctacatcgactgcgctctcgccaacatgacacaggaaattacacgctcgccttcc gaccccggagcgctgcgattcgctgtcatcatcaccgatggtcacgtgacaggaaacccc tgcggcggggtgaaggtgacggcagagcgggcgcgcgacgagggcatcagaatgtttgtg gtcgcagcaacgaagaacgtggacgagacgggtctgagggagatcgctaactctccggcc aacgtctacagaagagacttcctggctgtcgatctcagtggcaacaacgctgttatacag caagacactatagaccgcatcatcaagaccatgacccatctggcctatcaggagtgctac caggtgaagtgtctggagacagaaggacctcctggtcccaagggacacagtggacacaag ggggtcaaaggagacaacggcgaccccggtcctaaaggtgagaggggaagacagggcgac cccggcatcgagggtcacatcggtcaaccaggagtcaagggggaaatcggtctgaagggt gaaaagggggagataggagctgaggggatgaagggtgtggtcggcctcgctggacgcaac gggacagacggacagaagggtaagatcggacgcatcggcgctcccggctgcaaaggagat ccaggagacaggggtcctgatggtcacccaggagacgtgggcgatggtggacttcctgga acagacggagagaagggagattccggtcgaccaggaagagcaggccccctcggcccagtg ggagacgctggacctaagggtgagagagggagtcctggctcgcctggcttccctggagcc aaaggaacaccaggaactgttggaggcccaggagacaagggagaactggggagaagagga gactttgggctgaagggggatcagggaccagatggtgttaaaggagacaggggagaggcg gggcctgaggggctgagaggactaccaggggaagtaggaaacaaaggaaccaagggagac aacggactcccggggccgcgcggcccccccggctcttcaggagaggcagggaagaacggt acccgtggcgaccccggtgatgctggaccgagaggagaccccggccaaccaggaccaaag ggcgacgtgggaagagctggcttcagttacccaggaccaagaggaccaacgggagaccgt ggggagaagggtggtccagggcccaggggaggcagaggagactgtggccccaagggaggg ccaggaggaaaggggacccctggagaggagggagaaccagggcctcagggagaacctgga ctcagaggaccaagaggagtgggtggacgagacggagatcaaggtcctgagggagaccct ggcctcacagaatgtgatgtcatgaactacatcagagagacctgcggctgctgtgactgt gagaagcggtgtggggcgctggacatcgtgttcgtgattgacagctcagagtcggtgggt ctgaccaacttcaccctggagaagaactttgtcatcaacaccatcaacagactgggatct atggccaaggaccccaactcagagacagggaccagagtgggcgtggttcagtacagtcat agcggaaccttccaggccatccggctcaacgactccaagatcgactccctgtctgccttc aaggatgcagtgaagcgtctggagtggatagccggcgggacgtggaccccgtcagcgctg aagtacgcctacgaccacctgatcaaggacagccgccgagctaaagccaacgtcaccgtg gtggtcatcacagacggacggttcgaccccagggacgacgactcactgctcacatacctc tgcagtgaccccagtgtggatgtgagtgccatcggtataggagacatgtttgaccagata gaggagaatgagagtctgaagagtatagcctgtcagagagacgggagggtgctggggatg agacgcttcgctgatctggtggcggaggagttcatcgacaagatagaggccgtgctctgc ccagaccctgtgatcgtgtgccctgaccttccctgtaaaactgagccagcagtggccagc tgtgttcagcgccccgtggaccttgtgttcatgctggacgggtcagagaggatgggagtg gagaaccaccgccgcgccaaggagttcatcgagaacgtggctcgccgcctcaccctggcc aacggcgaatcagacgacaggaatgcccgcgtggccctgctgcagtacggcggccaatca gaacagagggtggagttctcgctcacgcacaatctgacggtgatcgctgattcgctggcg gggatgagctacatggactccgcctcttctctgggcagcgccatcatacacgctgtcaat aacctagttatgtcacagggcacccgcctggcacgtcgtaacgctgaactgtccttcgtc ttcatcactgacggcatcactgcgggcaacagcctggaggagggcgtctcagccatgcgg cgggccgagggcattcccacggtgatcgccatggggaccgacacggaccaggaagtgctg aggaaggttgccctgggagacacgttggccatctttagaggggaggactacgccacgctg gggaaacccaccttcttcgaacgcttcatccgctgggtctgctaa

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