Coregonus clupeaformis (lake whitefish): 121580555
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Entry
121580555 CDS
T08357
Name
(RefSeq) ras-related protein Rab-12-like isoform X1
KO
K07907
Ras-related protein Rab-12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121580555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121580555
04031 GTP-binding proteins [BR:
cclu04031
]
121580555
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
121580555
Endosome - Lysosome transport
Rab GTPases and associated proteins
121580555
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121580555
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab12/18
121580555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
SRPRB
AAA_14
Septin
PduV-EutP
AAA_16
AAA_24
AAA_22
NACHT
AAA
Zn-ribbon_GIR1
FeoB_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
121580555
NCBI-ProteinID:
XP_045080591
LinkDB
All DBs
Position
14:6239236..6293231
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AA seq
240 aa
AA seq
DB search
MDSRYEIQRMAGGRGSANASPALGGQSRRRKMPPRPADYKLQIIIIGSRGVGKTSLMERF
TDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRGAKGIVLVY
DITKQETFDDLPKWMKMIDKYASEEAELLLVGNKLDCETDRIITKQTAERLVSRISGMRF
CEASAKDNFNVEECFLKLVDDILAKMPLEIPSKDVSNSILSLQPEPEVPPELNPPRVRCC
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaggtatgagatccagcggatggccggtggtaggggatcagcgaacgcttcc
cccgctctggggggacagtctcgccgcaggaagatgccgccgaggcccgccgattacaaa
cttcaaatcatcattatcggctctcgtggcgtgggcaaaaccagtctaatggaaagattt
accgacgacaccttctgtgaagcatgcaaatcaaccgttggagtagattttaagatcaag
acggtggagctgagagggaagaagatcaggttgcagatctgggatacagctggtcaggag
agattcaacagtataacctcggcctactaccgtggggccaagggaatagtactggtctat
gatatcaccaagcaggaaaccttcgacgacctacccaaatggatgaagatgatcgacaag
tatgcttcagaggaggcagagctgctgctagtggggaacaagctggactgtgagacagac
cgcatcatcactaaacagactgcagagaggcttgtctcgaggatatctgggatgcgtttc
tgcgaggctagtgccaaggataactttaacgtggaggagtgctttctaaaactagtggac
gacattctagcgaagatgcctctggagattcccagtaaggatgtttccaacagtatcctg
tctctgcagcctgaaccggaagtgcctcctgagctcaacccgccacgcgtgcgctgttgc
tga
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