Coregonus clupeaformis (lake whitefish): 121580563
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Entry
121580563 CDS
T08357
Name
(RefSeq) ras-related protein Rab-31
KO
K07891
Ras-related protein Rab-22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121580563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121580563
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cclu04031
]
121580563
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121580563
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121580563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
GTP_EFTU
Gtr1_RagA
AAA_16
AAA_7
NACHT
TniB
DUF87
MCR_beta
HTH_28
Motif
Other DBs
NCBI-GeneID:
121580563
NCBI-ProteinID:
XP_041751437
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All DBs
Position
14:6773001..6795277
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AA seq
194 aa
AA seq
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MAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWD
TAGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKN
DLGDIREVPMKEAKDFAESIAAIFMETSARNAVNVEELFQKISKQIPPLENPDLDSNESF
KITRQPPPSNKRCC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggccatacgggaactaaaagtgtgtcttcttggggatacaggagtgggcaagtctagt
attgtatgtcgttttgtgcaagaccatttcgaccacaacatcagtccgacgataggggca
tcatttctaaccaagacggtgccgtgtggaaatgaactacacaagttcctcatctgggac
acggcgggacaggaaaggttccactcgctagctcccatgtactacagagggtctgccgct
gctgtcatagtctatgacatcaccaaactggactctttccagacactgaagaaatgggtg
aaggagctgaaggaacatggtcctgaggacatcgttgtagccatcgcagggaacaagaac
gacttgggggacatcagggaagttcctatgaaggaagctaaggactttgctgagtccatt
gcggccatcttcatggagaccagcgccagaaacgctgtcaacgtggaggagctctttcag
aagatcagtaaacagattccgcccctggagaatccagatttagacagcaacgagtccttc
aagataacccggcagccccctccgtctaacaaacgctgctgctag
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